DRSC/TRiP Functional Genomics Resources

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Protein Alignment gbb and unc-129

DIOPT Version :9

Sequence 1:NP_001286786.1 Gene:gbb / 37778 FlyBaseID:FBgn0024234 Length:455 Species:Drosophila melanogaster
Sequence 2:NP_501566.1 Gene:unc-129 / 177719 WormBaseID:WBGene00006852 Length:407 Species:Caenorhabditis elegans


Alignment Length:461 Identity:96/461 - (20%)
Similarity:166/461 - (36%) Gaps:141/461 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 KLDVSY------EILEFLGIAERPT--HLSSHQLSLRKSAPKFLLDVYHRITAEEGLSDQDEDDD 117
            |:||..      ::|.|.......|  |.|||.|:      :.:.::|      |...|:|.::|
 Worm    20 KVDVDLINETIRDLLHFKSSDPNVTSFHRSSHTLT------EHMKNLY------ENFIDEDSNED 72

  Fly   118 YERGHRSRRSADLEEDEGEQQKNFITDLDKRAIDESDIIM------------TFLNKRHHNV--- 167
               |:..|.   :|...|:.:...:...|....|..:.||            :|..:|...:   
 Worm    73 ---GNLVRA---IEPAVGKFEGQEVLVFDVEGFDSHESIMRAELHFYLRRRDSFARRRSRQIRAK 131

  Fly   168 --------------------DELRHEHGRRLWFDVSNVPNDNYLVMAELRIYQNANEGKWLTANR 212
                                ||...|: :.:| |.:....|:|.:.|:..:::...|...:....
 Worm   132 SVCVNEYCRQQTLKKIRVGGDENLEEY-KVIW-DATKSVFDSYHLDAKQAVFRITREHSKMRPYA 194

  Fly   213 EFT------ITVYAIGTGTLGQHTMEPLSSVNTTGDYVGWLELNVTEGLHEWLVKSKD--NHGI- 268
            |..      :.:|               |.||.|.|.|     :|.:...:...|.:|  |..: 
 Worm   195 EMIRKSTPFLVIY---------------SKVNHTLDTV-----SVMKQTEQTKRKRRDLGNEELR 239

  Fly   269 -YIGAHAV--NRPDREVKLDDIGLIHRK------------VDDEFQPFMIGFFRGPELIKATAHS 318
             |...:::  :..|||.       |.||            .:|.:|.|      |.|       :
 Worm   240 EYYNYNSIPLDNDDREP-------IKRKNGKKNSLSEEISSEDVWQGF------GEE-------T 284

  Fly   319 SHHRSKRSASHPRKRKKSVSPNNVPLLEPMESTRSCQMQTLYIDFKDLGWHDWIIAPEGYGAFYC 383
            |....:|.|:     ::..:...|.||   ::...|..:.:.:..|..||..::|.|:.....:|
 Worm   285 SREERERIAN-----EELANDVRVVLL---QNKNRCHKEGVLVSLKHFGWDRYVIEPKTIETSFC 341

  Fly   384 SGECNFPLNAHMNATNHAIVQTLVHLLEPKKVPKPCCAPTRLGALPVLYHLNDENVNLKKYRNMI 448
            .|:|..|:.....|:|||::|:| ...||     .|||||.|.:|...|........::.|..|:
 Worm   342 KGKCAKPMLTSGKASNHAMLQSL-FAAEP-----VCCAPTNLKSLNFWYRDEKGRTVIRNYSKML 400

  Fly   449 VKSCGC 454
            :.||.|
 Worm   401 IGSCSC 406

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gbbNP_001286786.1 TGFb_propeptide 44..305 CDD:279078 57/310 (18%)
TGFB 354..455 CDD:214556 31/101 (31%)
unc-129NP_501566.1 TGFB 312..406 CDD:214556 30/99 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3900
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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