DRSC/TRiP Functional Genomics Resources

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Protein Alignment gbb and daf-7

DIOPT Version :9

Sequence 1:NP_001286786.1 Gene:gbb / 37778 FlyBaseID:FBgn0024234 Length:455 Species:Drosophila melanogaster
Sequence 2:NP_497265.1 Gene:daf-7 / 175237 WormBaseID:WBGene00000903 Length:350 Species:Caenorhabditis elegans


Alignment Length:460 Identity:97/460 - (21%)
Similarity:162/460 - (35%) Gaps:141/460 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 MFVATTPP------------AVEATQSGIYIDNGKDQTIMHRVLSEDDKLDVSY---EILEFLGI 74
            ||:|::.|            ....|.||:.|:..|    .||         ..|   |||:.|.:
 Worm     1 MFMASSLPVFIFLLSLPHGLTFNCTNSGVCIEKMK----QHR---------TEYLKNEILDQLNM 52

  Fly    75 AERPTHLSSHQLSLRKSAPKFLLDVYHRITAEEGLSDQDEDDDYERGHRSRRSADLEEDEGEQQK 139
            .|.|..|......::    ...|::|.         |..|.|:.:.|.........:...||...
 Worm    53 KEAPKGLKPMDPEMK----SVYLEMYR---------DLLEKDEQDMGVEMSFYTAKDPSYGENPS 104

  Fly   140 NFITDLD-KRAIDESDIIMTFLNKRHHNVDELRHEHGRRLWFDVS-NVP--NDNYLVMAELRIYQ 200
            ..:...| ...::.|||:...|.                    || .:|  :...|...::::|:
 Worm   105 QLVAKFDVTNDLERSDILQATLT--------------------VSIEIPAKDSGMLQDVQVQVYE 149

  Fly   201 NANEGKWLTANREFTITVYAIGTGTLGQHTME---PLSSVNTTGDYVGWLELNVTEGLHEWLVKS 262
            ...:|   :.....|..::|    |.|...:.   |:.:|.:      |..::..:|:   .||:
 Worm   150 KNEDG---SMGEMVTSGIFA----TKGSERISIQLPIDTVKS------WFTISPIQGI---FVKA 198

  Fly   263 K-DNHGIYIGAHAVNRPDREVKLDDIGLIHRKVDDEFQPFMIGFFRGPELIKATAHSSHHRSKRS 326
            . |...:     |::.......:|::.|                            ....|.|.|
 Worm   199 MLDGRNV-----ALHPQQTTADVDNMRL----------------------------QLSTRPKGS 230

  Fly   327 ASHPRKRKKSVSPNNVPLLEPMESTRSCQMQTLYIDFKDLGWHDWIIAPEGYGAFYCSGECNFPL 391
                |||:....    |:......::.|.:..|.|:|:.:|| |||:||..|.|:.|.|:|::  
 Worm   231 ----RKRRSHAK----PVCNAEAQSKGCCLYDLEIEFEKIGW-DWIVAPPRYNAYMCRGDCHY-- 284

  Fly   392 NAH---MNATNHAIVQTLVHLLEPKKVPKP----CCAPTRLGALPVLYHLNDENVNLKKYRNMIV 449
            |||   :..|.|:.:....|     ||..|    ||.||....:.::|...|..|::.....||.
 Worm   285 NAHHFNLAETGHSKIMRAAH-----KVSNPEIGYCCHPTEYDYIKLIYVNRDGRVSIANVNGMIA 344

  Fly   450 KSCGC 454
            |.|||
 Worm   345 KKCGC 349

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gbbNP_001286786.1 TGFb_propeptide 44..305 CDD:279078 44/271 (16%)
TGFB 354..455 CDD:214556 38/108 (35%)
daf-7NP_497265.1 TGFB 250..350 CDD:214556 38/108 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3900
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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