DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment gbb and Inhba

DIOPT Version :9

Sequence 1:NP_001286786.1 Gene:gbb / 37778 FlyBaseID:FBgn0024234 Length:455 Species:Drosophila melanogaster
Sequence 2:NP_032406.1 Gene:Inhba / 16323 MGIID:96570 Length:424 Species:Mus musculus


Alignment Length:452 Identity:108/452 - (23%)
Similarity:174/452 - (38%) Gaps:147/452 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    64 VSYEILEFLGIAERPTHLSSHQLSLRKSAPK-FLLDVYHRI-TAEEGLSDQDEDDDYERGHRSRR 126
            |...||..|.:.:||        .:.:..|| .||:...:: ..:.|          |.|:    
Mouse    58 VKKHILNMLHLKKRP--------DVTQPVPKAALLNAIRKLHVGKVG----------ENGY---- 100

  Fly   127 SADLEEDEGEQQKNFITDLDKRAIDESDIIMTFLNKRHHNVDELRHEHG---RRLWFDVSNVPND 188
             .::|:|.|.:.:  :.:|    ::::..|:||.            |.|   :.|.|::|...:|
Mouse   101 -VEIEDDIGRRAE--MNEL----MEQTSEIITFA------------ESGTARKTLHFEISKEGSD 146

  Fly   189 NYLVMAELRIYQNANEGKWL-----TANREFT-ITVYAIGTGTLGQHTMEPLSSVNTTGDYV--- 244
                   |.:.:.|.  .||     .|||..| :|:      .|.|....|..|:: |||..   
Mouse   147 -------LSVVERAE--VWLFLKVPKANRTRTKVTI------RLFQQQKHPQGSLD-TGDEAEEM 195

  Fly   245 ---------------------GWLELNVTEGLHEWLVKSKDNHGIYI--------GAHAV---NR 277
                                 .|....|:..:...|.:.|.:..:.|        ||..|   .:
Mouse   196 GLKGERSELLLSEKVVDARKSTWHIFPVSSSIQRLLDQGKSSLDVRIACEQCQESGASLVLLGKK 260

  Fly   278 PDREVKLD-------DIGLIHRKVDDEFQPFMIGFFRGPELIKATAHSSHHRSKRSASHPRKRKK 335
            ..:||..|       |.||...| :...:||::                 .::::|..||.:|::
Mouse   261 KKKEVDGDGKKKDGSDGGLEEEK-EQSHRPFLM-----------------LQARQSEDHPHRRRR 307

  Fly   336 SVSPNNVPLLEPMESTRSCQMQTLYIDFKDLGWHDWIIAPEGYGAFYCSGEC--------NFPLN 392
            ..       ||.......|..:..::.|||:||:||||||.||.|.||.|||        ...|:
Mouse   308 RG-------LECDGKVNICCKKQFFVSFKDIGWNDWIIAPSGYHANYCEGECPSHIAGTSGSSLS 365

  Fly   393 AHMNATNHAIVQTLVHLLEPKKVPKPCCAPTRLGALPVLYHLNDENVNLKKYRNMIVKSCGC 454
            .|....||..::.  |  .|....|.||.||:|..:.:||:.:.:|:..|..:||||:.|||
Mouse   366 FHSTVINHYRMRG--H--SPFANLKSCCVPTKLRPMSMLYYDDGQNIIKKDIQNMIVEECGC 423

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gbbNP_001286786.1 TGFb_propeptide 44..305 CDD:279078 59/293 (20%)
TGFB 354..455 CDD:214556 43/109 (39%)
InhbaNP_032406.1 TGFb_propeptide 56..291 CDD:366248 58/290 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 264..306 12/59 (20%)
TGF_beta_INHBA 317..424 CDD:381674 43/111 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3900
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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