DRSC/TRiP Functional Genomics Resources

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Protein Alignment gbb and Lefty1

DIOPT Version :10

Sequence 1:NP_477340.1 Gene:gbb / 37778 FlyBaseID:FBgn0024234 Length:455 Species:Drosophila melanogaster
Sequence 2:NP_034224.1 Gene:Lefty1 / 13590 MGIID:107405 Length:368 Species:Mus musculus


Alignment Length:376 Identity:73/376 - (19%)
Similarity:129/376 - (34%) Gaps:129/376 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   145 LDKRAIDESDIIMTFLNKRHHNVDELRHEH-----------------GRRLWFDVS--------- 183
            |||..: |..:|.:.:..::  |..|:|.|                 ||.|..:.|         
Mouse    43 LDKADV-EGMVIPSHVRTQY--VALLQHSHASRSRGKRFSQNLREVAGRFLVSETSTHLLVFGME 104

  Fly   184 -NVPNDNYLVMAELRIYQNANEGKWLTANREFT-------ITVYAIGTGTLGQHTMEPLSSVNTT 240
             .:|.::.||.|.||::|.......|...:..:       :|:..:.....|.:....:.|...:
Mouse   105 QRLPPNSELVQAVLRLFQEPVPRTALRRQKRLSPHSARARVTIEWLRFRDDGSNRTALIDSRLVS 169

  Fly   241 GDYVGWLELNVTEGLHEWLVKSKDNHGIYIGAHAVNRPDREVKLDDIGLIHRKVDDEFQPFMIGF 305
            ....||...:|||.::.|              ..::||                           
Mouse   170 IHESGWKAFDVTEAVNFW--------------QQLSRP--------------------------- 193

  Fly   306 FRGPELIKATAHSSH--------HRSKRSAS----------------HPRKRKKSVSPNNVPLLE 346
             |.|.|::.:....|        |:..|.|:                |....|...:..|.....
Mouse   194 -RQPLLLQVSVQREHLGPGTWSSHKLVRFAAQGTPDGKGQGEPQLELHTLDLKDYGAQGNCDPEA 257

  Fly   347 PM-ESTRSCQMQTLYIDFKDLGW-HDWIIAPEGYGAFYCSGECNFPLNAHMNATNHAIVQTLVHL 409
            |: |.||.|: |.:|:|.:.:.| .:||:.|.|:..:.|.|.|   |....:.|:.         
Mouse   258 PVTEGTRCCR-QEMYLDLQGMKWAENWILEPPGFLTYECVGSC---LQLPESLTSR--------- 309

  Fly   410 LEPKKVPKPCCAPTRLGALPVLYHLND------ENVNLKKYRNMIVKSCGC 454
             .|...|:.|.| :.:.:||::..:.:      :.|:|.   ||.|::|.|
Mouse   310 -WPFLGPRQCVA-SEMTSLPMIVSVKEGGRTRPQVVSLP---NMRVQTCSC 355

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gbbNP_477340.1 TGFb_propeptide 45..305 CDD:459906 32/193 (17%)
TGF_beta_BMP5_like 353..455 CDD:381639 27/109 (25%)
Lefty1NP_034224.1 TGFb_propeptide <43..203 CDD:480997 35/204 (17%)
TGF_beta_LEFTY1_2 264..355 CDD:381636 27/108 (25%)

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