DRSC/TRiP Functional Genomics Resources

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Protein Alignment gbb and Gdf2

DIOPT Version :10

Sequence 1:NP_477340.1 Gene:gbb / 37778 FlyBaseID:FBgn0024234 Length:455 Species:Drosophila melanogaster
Sequence 2:NP_062379.3 Gene:Gdf2 / 12165 MGIID:1321394 Length:428 Species:Mus musculus


Alignment Length:513 Identity:121/513 - (23%)
Similarity:187/513 - (36%) Gaps:173/513 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 LGMVLLMFVATTPPAV--------EATQSGIYIDNGKDQTIMH-RVLSEDDKLDVSYEILEFLGI 74
            |.:.||:.|....|..        |...|.:.:....::.:.. ::..|:.|:|    .|..|.:
Mouse    11 LPLFLLVCVTQQKPLQNWEQASPGENAHSSLGLSGAGEEGVFDLQMFLENMKVD----FLRSLNL 71

  Fly    75 AERPTHLSSHQLSLRKSAPKFLLDVYHRITAEEGLSDQDEDDDYERGHRSRRSADLEEDEGEQQK 139
            :..|:     |...|...|::::|:|:|.|.                                  
Mouse    72 SGIPS-----QDKTRAEPPQYMIDLYNRYTT---------------------------------- 97

  Fly   140 NFITDLDKRAIDESDIIMTFLNKRHHNVDEL------------RHEHGRRLWFDVSNVPNDNYLV 192
                  ||.:...|:|:.:|      :|::.            :|    .|.|::| :|....:.
Mouse    98 ------DKSSTPASNIVRSF------SVEDAISTAATEDFPFQKH----ILIFNIS-IPRHEQIT 145

  Fly   193 MAELRIYQNANEGKWLTANREFTITVY-----------AIGTGTLGQHTMEPLSSVNTTGDYVGW 246
            .||||:|.:.......|...|.::.||           |.||.|.       |.|.:...:  ||
Mouse   146 RAELRLYVSCQNDVDSTHGLEGSMVVYDVLEDSETWDQATGTKTF-------LVSQDIRDE--GW 201

  Fly   247 LELNVTEGLHEWLVKSKDNHGIYIGAHAVNRPDREVKLDDIGLIHRKVDDEFQ----------PF 301
            ..|.|:..:..|:....          ..|:...||.:..    ||:..|...          ||
Mouse   202 ETLEVSSAVKRWVRADS----------TTNKNKLEVTVQS----HRESCDTLDISVPPGSKNLPF 252

  Fly   302 ---------------------MIGFFRGPELIKATAHSSHHRSKRSASHP------------RKR 333
                                 |||..:...|:| ||.:::..:..|....            .:|
Mouse   253 FVVFSNDRSNGTKETRLELKEMIGHEQETMLVK-TAKNAYQVAGESQEEEGLDGYTAVGPLLARR 316

  Fly   334 KKSVSPNNVPLLEPMESTRSCQMQTLYIDFKDLGWHDWIIAPEGYGAFYCSGECNFPLNAHMNAT 398
            |:|..           ::..||..:|.::|:|:||..|||||:.|.|:.|.|.|.|||...:..|
Mouse   317 KRSTG-----------ASSHCQKTSLRVNFEDIGWDSWIIAPKEYDAYECKGGCFFPLADDVTPT 370

  Fly   399 NHAIVQTLVHLLEPKKVPKPCCAPTRLGALPVLYHLNDENVNLKK--YRNMIVKSCGC 454
            .||||||||||..|.||.|.||.||:|..:.:||. :|..|...|  |..|.|..|||
Mouse   371 KHAIVQTLVHLKFPTKVGKACCVPTKLSPISILYK-DDMGVPTLKYHYEGMSVAECGC 427

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gbbNP_477340.1 TGFb_propeptide 45..305 CDD:459906 54/314 (17%)
TGF_beta_BMP5_like 353..455 CDD:381639 51/104 (49%)
Gdf2NP_062379.3 TGFb_propeptide 69..215 CDD:480997 40/210 (19%)
TGF_beta_BMP9 324..428 CDD:381670 51/105 (49%)
Interaction with ENG. /evidence=ECO:0000250|UniProtKB:Q9UK05 401..415 4/14 (29%)

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