DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment gbb and Bmp8a

DIOPT Version :9

Sequence 1:NP_001286786.1 Gene:gbb / 37778 FlyBaseID:FBgn0024234 Length:455 Species:Drosophila melanogaster
Sequence 2:NP_001242948.1 Gene:Bmp8a / 12163 MGIID:104515 Length:412 Species:Mus musculus


Alignment Length:441 Identity:142/441 - (32%)
Similarity:215/441 - (48%) Gaps:92/441 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 TIMHRVLSEDDKLDVSYEILEFLGIAERPTHLSSHQLSLR-KSAPKFLLDVYHRITAEEGLSDQD 113
            |...|.|...::.|:..|||..||:..||...:....:.: .|||.|:||:||.:|         
Mouse    29 TCPQRRLGARERRDMQREILAVLGLPGRPRPRAQPAAARQPASAPLFMLDLYHAMT--------- 84

  Fly   114 EDDDYERGHRSRRSADLEEDEGEQQKNFITDLDKRAIDESDIIMTFLN--KRHHNVDELRHEHGR 176
             |||               |.|..|.:         :..:|::|:|:|  :|...:. .:..|.:
Mouse    85 -DDD---------------DGGPPQAH---------LGRADLVMSFVNMVERDRTLG-YQEPHWK 123

  Fly   177 RLWFDVSNVPNDNYLVMAELRIYQNANEGKWLTANREFTITVYAIGTGTLGQHT----------M 231
            ...||::.:|....:..||.|||:   |......|....|:::.:    :.:|:          :
Mouse   124 EFHFDLTQIPAGEAVTAAEFRIYK---EPSTHPLNTTLHISMFEV----VQEHSNRESDLFFLDL 181

  Fly   232 EPLSSVNTTGDYVGWLELNVTEGLHEWLVKSKDNHGIYIGAHAVNRPDREVKLDDIGLIHRKVDD 296
            :.|.|    || .|||.|::|.....||:....:.|:.:.....:....:..|  .||:.|:...
Mouse   182 QTLRS----GD-EGWLVLDITAASDRWLLNHHKDLGLRLYVETADGHSMDPGL--AGLLGRQAPR 239

  Fly   297 EFQPFMIGFFRGPELIKATAHSSHHRSKRSA-----SHPRKRKKSVSPNNVP-LLEPMESTRS-- 353
            ..||||:.|||        |..|..|:.|:|     ..|:|..:...||.:| :.:....:|.  
Mouse   240 SRQPFMVTFFR--------ASQSPVRAPRAARPLKRRQPKKTNELPHPNKLPGIFDDGHGSRGRE 296

  Fly   354 -CQMQTLYIDFKDLGWHDWIIAPEGYGAFYCSGECNFPLNAHMNATNHAIVQTL----------- 406
             |:...||:.|:||||.||:|||:||.|:||.|||.|||::.||||||||:|:|           
Mouse   297 VCRRHELYVSFRDLGWLDWVIAPQGYSAYYCEGECAFPLDSCMNATNHAILQSLVSTTVACCDRW 361

  Fly   407 --VHLLEPKKVPKPCCAPTRLGALPVLYHLNDENVNLKKYRNMIVKSCGCH 455
              |||::|..|||.|||||:|.|..|||:.:..||.|:|:|||:||:||||
Mouse   362 SGVHLMKPDVVPKACCAPTKLSATSVLYYDSSNNVILRKHRNMVVKACGCH 412

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gbbNP_001286786.1 TGFb_propeptide 44..305 CDD:279078 64/267 (24%)
TGFB 354..455 CDD:214556 62/113 (55%)
Bmp8aNP_001242948.1 TGFb_propeptide 32..248 CDD:279078 63/264 (24%)
TGF_beta 298..411 CDD:278448 61/112 (54%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 172 1.000 Domainoid score I3704
eggNOG 1 0.900 - - E1_KOG3900
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 260 1.000 Inparanoid score I3096
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG47130
OrthoDB 1 1.010 - - D1063560at2759
OrthoFinder 1 1.000 - - FOG0000576
OrthoInspector 1 1.000 - - otm44064
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11848
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X157
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1312.940

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