DRSC/TRiP Functional Genomics Resources

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Protein Alignment gbb and Bmp2

DIOPT Version :9

Sequence 1:NP_001286786.1 Gene:gbb / 37778 FlyBaseID:FBgn0024234 Length:455 Species:Drosophila melanogaster
Sequence 2:NP_031579.2 Gene:Bmp2 / 12156 MGIID:88177 Length:394 Species:Mus musculus


Alignment Length:429 Identity:136/429 - (31%)
Similarity:197/429 - (45%) Gaps:111/429 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 SEDDKLDVSYEILEFLGIAERPTHLSSHQLSLRKSAPKFLLDVYHRITAEEGLSDQDEDDDYERG 121
            |||...:....:|...|:.:|||.      |.....|.::||:|.|.:.:.|....|        
Mouse    45 SEDVLSEFELRLLSMFGLKQRPTP------SKDVVVPPYMLDLYRRHSGQPGAPAPD-------- 95

  Fly   122 HRSRRSADLEEDEGEQQKNFITDLDKRAIDESDIIMTFLNKRHHN--VDELRHEHG---RRLWFD 181
            ||..|:|                      ..::.:.:|    ||.  |:||....|   ||.:|:
Mouse    96 HRLERAA----------------------SRANTVRSF----HHEEAVEELPEMSGKTARRFFFN 134

  Fly   182 VSNVPNDNYLVMAELRIYQN------ANEG-----------KWLTANREFTITVYAIGTGTLGQH 229
            :|:||:|.:|..|||:|::.      .|..           |...||.:|.:| ..:.|..:.|:
Mouse   135 LSSVPSDEFLTSAELQIFREQIQEALGNSSFQHRINIYEIIKPAAANLKFPVT-RLLDTRLVNQN 198

  Fly   230 TMEPLSSVNTTGDYVGWLELNVTEGLHEWLVKSKDNHGIYIG-AHAVNRP---DREVKLDDIGLI 290
            |.:             |...:||..:..|..:...|||..:. ||....|   .|.|::.  ..:
Mouse   199 TSQ-------------WESFDVTPAVMRWTTQGHTNHGFVVEVAHLEENPGVSKRHVRIS--RSL 248

  Fly   291 HRKVDD----EFQPFMIGFFRGPELIKATAHSSHHRSKRSASH-PRKRKKSVSPNNVPLLEPMES 350
            |:  |:    :.:|.::.|  |.:   ...|..|.|.||.|.| .|||.||              
Mouse   249 HQ--DEHSWSQIRPLLVTF--GHD---GKGHPLHKREKRQAKHKQRKRLKS-------------- 292

  Fly   351 TRSCQMQTLYIDFKDLGWHDWIIAPEGYGAFYCSGECNFPLNAHMNATNHAIVQTLVHLLEPKKV 415
              ||:...||:||.|:||:|||:||.||.||||.|||.|||..|:|:||||||||||:.:. .|:
Mouse   293 --SCKRHPLYVDFSDVGWNDWIVAPPGYHAFYCHGECPFPLADHLNSTNHAIVQTLVNSVN-SKI 354

  Fly   416 PKPCCAPTRLGALPVLYHLNDENVNLKKYRNMIVKSCGC 454
            ||.||.||.|.|:.:||...:|.|.||.|::|:|:.|||
Mouse   355 PKACCVPTELSAISMLYLDENEKVVLKNYQDMVVEGCGC 393

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gbbNP_001286786.1 TGFb_propeptide 44..305 CDD:279078 63/277 (23%)
TGFB 354..455 CDD:214556 58/101 (57%)
Bmp2NP_031579.2 TGFb_propeptide 43..265 CDD:279078 63/277 (23%)
TGFB 294..394 CDD:214556 58/101 (57%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3900
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X157
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.810

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