DRSC/TRiP Functional Genomics Resources

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Protein Alignment gbb and bmp5

DIOPT Version :9

Sequence 1:NP_001286786.1 Gene:gbb / 37778 FlyBaseID:FBgn0024234 Length:455 Species:Drosophila melanogaster
Sequence 2:XP_004914553.1 Gene:bmp5 / 100494976 XenbaseID:XB-GENE-479371 Length:449 Species:Xenopus tropicalis


Alignment Length:445 Identity:155/445 - (34%)
Similarity:231/445 - (51%) Gaps:56/445 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 NGKDQTIMHRVLSEDDKLDVSYEILEFLGIAERPTHLSSHQLSLRKSAPKFLLDVYHRITAEE-- 107
            |....:.::|.|...::.::..|||..||:..||...|..:.:  .|||.|:||:|:.:..|:  
 Frog    27 NHVHSSFIYRRLRNHERKEIQREILSILGLPHRPRPFSPGKQA--SSAPLFMLDLYNAMAKEDDH 89

  Fly   108 --------GLSDQDED---------DDYERGHRSRRSADLEEDE----GEQQKNFITDLDKRAID 151
                    |...:...         :.|.|..::.|:|.|....    ..|..||:.|       
 Frog    90 SMLGYTLSGAMLESRGLRKGYPVVANGYSRKAQAYRNAPLTTQRPPLASLQDSNFLND------- 147

  Fly   152 ESDIIMTFLNKRHHNVDELRHEHGRRLW----FDVSNVPNDNYLVMAELRIYQNANEGKWLTANR 212
             :|::|:|:|....:.|   ..|.||.:    ||::.:|:...:..||.|||::.:..::  .|.
 Frog   148 -ADMVMSFVNLVERDKD---FSHNRRHYKEFRFDLTQIPHGEAVTAAEFRIYKDRSNNRF--GNE 206

  Fly   213 EFTITVYAIGTGTLGQHTMEPLSSVNTTGDY-VGWLELNVTEGLHEWLVKSKDNHGIYIGAHAVN 276
            ...|::|.|......:.....|........| ||||..::|...:.|::..::|.|:.:.|...:
 Frog   207 TLKISIYQIIKDYSNRDADLFLLDTQRVQTYDVGWLVFDITVTSNHWVINPQNNLGLQLCAETSD 271

  Fly   277 RPDREVKLDDIGLIHRKVDDEFQPFMIGFFRGPELIKATAHSSH------HRSKRSASHPRKRKK 335
              .|.|.:...|||.|......|||::.||:..|::..:..:::      .|:|.:.||...|..
 Frog   272 --GRSVSVKSAGLIGRHGPQSKQPFLVAFFKASEVLLRSVRATNTKKKKQDRNKSTTSHDASRMP 334

  Fly   336 SVSPNNVPLLEPMESTRSCQMQTLYIDFKDLGWHDWIIAPEGYGAFYCSGECNFPLNAHMNATNH 400
            |:...|.     .|..::|:...||:.|:||||.|||||||||.||||.|||:||||||||||||
 Frog   335 SIGDYNT-----SEQKQACKKHELYVSFRDLGWEDWIIAPEGYAAFYCDGECSFPLNAHMNATNH 394

  Fly   401 AIVQTLVHLLEPKKVPKPCCAPTRLGALPVLYHLNDENVNLKKYRNMIVKSCGCH 455
            |||||||||:.|..|||||||||:|.|:.|||..:..||.|||||||:|:|||||
 Frog   395 AIVQTLVHLMFPDHVPKPCCAPTKLNAISVLYFDDSSNVILKKYRNMVVRSCGCH 449

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gbbNP_001286786.1 TGFb_propeptide 44..305 CDD:279078 69/287 (24%)
TGFB 354..455 CDD:214556 73/100 (73%)
bmp5XP_004914553.1 TGFb_propeptide 27..298 CDD:366248 69/287 (24%)
TGF_beta_BMP5 337..449 CDD:381665 75/116 (65%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 172 1.000 Domainoid score I3678
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 259 1.000 Inparanoid score I3042
OMA 1 1.010 - - QHG47130
OrthoDB 1 1.010 - - D1063560at2759
OrthoFinder 1 1.000 - - FOG0000576
OrthoInspector 1 1.000 - - otm49237
Panther 1 1.100 - - O PTHR11848
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X157
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1010.080

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