DRSC/TRiP Functional Genomics Resources

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Protein Alignment gbb and bmp8

DIOPT Version :9

Sequence 1:NP_001286786.1 Gene:gbb / 37778 FlyBaseID:FBgn0024234 Length:455 Species:Drosophila melanogaster
Sequence 2:XP_002941697.3 Gene:bmp8 / 100494880 XenbaseID:XB-GENE-485424 Length:425 Species:Xenopus tropicalis


Alignment Length:475 Identity:163/475 - (34%)
Similarity:247/475 - (52%) Gaps:83/475 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LRNTSEAVAVLASLGLGMVLLMFVATTPPAVEATQSGIYIDNGKDQTIMHRVLSEDDKLDVSYEI 68
            |:.|..|:::||.|.                :.| ||.::.|....:.:.|.||..:|.::..||
 Frog    11 LQMTLAAMSILAILW----------------DLT-SGSFVKNHLHSSFIQRKLSGREKREMQREI 58

  Fly    69 LEFLGIAERPTHLSSHQLSLRKSAPKFLLDVYHRITAEEGLSDQDEDDDYERGHRSRRSADLEED 133
            |..:|:..||...|...:.  .|||.|:||:||.:.:||   |:|......|.|           
 Frog    59 LSIMGLPGRPRPASGGHVP--SSAPLFMLDLYHAMCSEE---DEDGMPGVSRAH----------- 107

  Fly   134 EGEQQKNFITDLDKRA------IDESDIIMTFLNKRHHNVDELRHE-HGRRLWFDVSNVPNDNYL 191
                    .|.|..::      |.|:|.:|:|:|...|:.|..:.: :.:...||::.:|....:
 Frog   108 --------FTTLSTQSPPLGTVISEADTVMSFVNMVEHDRDIFQQKPYWKEFKFDMTQIPTGESV 164

  Fly   192 VMAELRIYQNANEGKWLTANREFTITVYAIGTGTLGQHTMEP----LSSVNTTGDYVGWLELNVT 252
            .:||.|:::..:..:.|  ||...|:::.|   ...:...||    |...:|.....|||..:||
 Frog   165 TVAEFRLFKMRSFLRNL--NRTLHISLFEI---KKERGHREPELTLLDHESTLAGDEGWLVFDVT 224

  Fly   253 EGLHEWLVKSKDNHGI--YIGAHAVNRPDREVKLDD--IGLIHRKVDDEFQPFMIGFFRGPELIK 313
            ...:.||:.||:|.||  |:      ..|:...:|.  .|::.|:.....||||:.|||      
 Frog   225 AASNHWLLNSKNNLGIRLYV------ETDQGQSIDPGIAGILGRRAPRSKQPFMVTFFR------ 277

  Fly   314 ATAHSSHHRSKRSASHPRKRKKS----VSPNNVP-LLEPMESTRS---CQMQTLYIDFKDLGWHD 370
              ...:..||.|:....|||::.    ..||.:| :|:.:..|.|   |:...||:.|:||||.|
 Frog   278 --VSRNQIRSARAVKQLRKRQQKKHDLPHPNKLPGILDHLHVTDSRQVCKRHELYVSFRDLGWLD 340

  Fly   371 WIIAPEGYGAFYCSGECNFPLNAHMNATNHAIVQTLVHLLEPKKVPKPCCAPTRLGALPVLYHLN 435
            |:|||:||.||||.|||:|||::.||||||||:|:||||::|:.|||.|||||:|.|..|||:.:
 Frog   341 WVIAPQGYSAFYCEGECSFPLDSCMNATNHAILQSLVHLMKPESVPKACCAPTKLSATSVLYYDS 405

  Fly   436 DENVNLKKYRNMIVKSCGCH 455
            :.||.|||:|||:|||||||
 Frog   406 NNNVILKKHRNMVVKSCGCH 425

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gbbNP_001286786.1 TGFb_propeptide 44..305 CDD:279078 72/275 (26%)
TGFB 354..455 CDD:214556 65/100 (65%)
bmp8XP_002941697.3 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 172 1.000 Domainoid score I3678
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 259 1.000 Inparanoid score I3042
OMA 1 1.010 - - QHG47130
OrthoDB 1 1.010 - - D1063560at2759
OrthoFinder 1 1.000 - - FOG0000576
OrthoInspector 1 1.000 - - otm49237
Panther 1 1.100 - - O PTHR11848
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X157
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1111.080

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