DRSC/TRiP Functional Genomics Resources

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Protein Alignment gbb and gdf5

DIOPT Version :10

Sequence 1:NP_477340.1 Gene:gbb / 37778 FlyBaseID:FBgn0024234 Length:455 Species:Drosophila melanogaster
Sequence 2:XP_002662587.2 Gene:gdf5 / 100334210 ZFINID:ZDB-GENE-990415-39 Length:474 Species:Danio rerio


Alignment Length:467 Identity:120/467 - (25%)
Similarity:182/467 - (38%) Gaps:138/467 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 ATTPPAVEATQSGIYIDNGKDQTIMHRVLSEDDKLDVSYEILEFLGIAERPTHLSSHQLSLRKSA 92
            ::.|.||.|..:||                              ..||..|:||.      .|||
Zfish   105 SSAPAAVRAAPAGI------------------------------KSIAPAPSHLR------MKSA 133

  Fly    93 PK----------------FLLDVYHRITAEEGLSDQDEDDDYERGHRSRRSADLEEDEGEQQKNF 141
            .|                ::|.:|..:|:    .|.:....:|.|                ..|.
Zfish   134 VKLENSEEPKHPLVIPHDYMLSLYWSLTS----GDVNTSVLHEAG----------------MANT 178

  Fly   142 ITDLDKRAIDESDIIMTFLNKRHHNVDELRHEHGRRLWFDVSNVPNDNYLVMAELRIY------- 199
            ||....|..||             ....||.:   |..|::|::..:. |:.|||||.       
Zfish   179 ITSFVDRGQDE-------------RAPLLRRQ---RYLFNISSMEKEG-LLGAELRILRKKHMDS 226

  Fly   200 QNANEGKWLTANREFTITVYAIGTGTLGQHTMEPLSSVNTTGDYVGWLELNVTEGLHEWLV--KS 262
            :.|...:.:...|.||.   |.|..........|..|  .:..|  |...::      |.|  ..
Zfish   227 RKATFSEGMAVLRLFTC---ASGKNAAVLLQARPFDS--HSASY--WEVFDI------WKVFKNF 278

  Fly   263 KDNHGIYIGAHAVNRPDREVKLDDIGLIHRKVDDEFQPFMIGF----FRGPELIKATAHSSH--- 320
            ::...:.:...||:. .|.:.|..:||.......:.:.|.:.|    .||....:..|.|.|   
Zfish   279 RNTPQLCLELDAVDH-GRPLDLRLLGLSRAGRQTKEKAFFVVFGRTKKRGLFYNEIKARSGHDNK 342

  Fly   321 --------HRSKRSASHPRKRKKSVSPNNVPLLEPMESTRSCQMQTLYIDFKDLGWHDWIIAPEG 377
                    .|..|.|..||.:|        |:..|.:   .|..:.|:::||::||.||||||..
Zfish   343 TVYEYLFTQRRMRRAPLPRGKK--------PIKNPKQ---RCNRKQLHVNFKEMGWDDWIIAPLE 396

  Fly   378 YGAFYCSGECNFPLNAHMNATNHAIVQTLVHLLEPKKVPKPCCAPTRLGALPVLYHLNDENVNLK 442
            |.||:|.|.|:||:.:|:..|||||:|||::.::|:..|..||.||||..:.:||..:..||..|
Zfish   397 YEAFHCDGVCDFPIRSHLEPTNHAIIQTLMNSMDPRSTPPTCCVPTRLSPISILYIDSANNVVYK 461

  Fly   443 KYRNMIVKSCGC 454
            :|.:|:|:||||
Zfish   462 QYEDMVVESCGC 473

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gbbNP_477340.1 TGFb_propeptide 45..305 CDD:459906 51/284 (18%)
TGF_beta_BMP5_like 353..455 CDD:381639 49/102 (48%)
gdf5XP_002662587.2 None

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