DRSC/TRiP Functional Genomics Resources

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Protein Alignment eIF6 and eif-6

DIOPT Version :9

Sequence 1:NP_659573.1 Gene:eIF6 / 37776 FlyBaseID:FBgn0034915 Length:245 Species:Drosophila melanogaster
Sequence 2:NP_493272.1 Gene:eif-6 / 173169 WormBaseID:WBGene00001234 Length:246 Species:Caenorhabditis elegans


Alignment Length:245 Identity:151/245 - (61%)
Similarity:200/245 - (81%) Gaps:1/245 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MALRVQFENNDDIGVFTKLTNTYCLVAIGGSETFYSAFEAELGDTIPVVHANVGGCRIIGRLTVG 65
            |||||.:|.::|:|||..|||:||||.:||::.|||..||||.|.|||||.::...||:||||||
 Worm     1 MALRVDYEGSNDVGVFCTLTNSYCLVGVGGTQNFYSILEAELSDLIPVVHTSIASTRIVGRLTVG 65

  Fly    66 NRNGLLVPNSTTDEELQHLRNSLPDAVKIYRVEERLSALGNVIACNDYVALVHPDLDKETEEIIA 130
            ||:||||||:|||:|||||||||||.|.|.||:||||||||||||||:||:||.::..|||:.:.
 Worm    66 NRHGLLVPNATTDQELQHLRNSLPDEVAIRRVDERLSALGNVIACNDHVAIVHAEISAETEQALV 130

  Fly   131 DVLKVEVFRQTIADNSLVGSYAVLSNQGGMVHPKTSIQDQDELSSLLQVPLVAGTVNRGSEVLAA 195
            :||||||||.::|.|||||||.:||:.|.:|..:|..:.|.|:::|||:|:||||.|||||::.|
 Worm   131 EVLKVEVFRVSLAQNSLVGSYCILSSNGCLVAARTPPETQREIAALLQIPVVAGTCNRGSELIGA 195

  Fly   196 GMVVNDWLSFVGMNTTATEISVIESVFKL-NQAQPATVTTKLRAALIEDM 244
            |||||||::|.|:::|:||:||:||:||| .|..|.:::.:||..|||.|
 Worm   196 GMVVNDWVAFCGLDSTSTELSVVESIFKLGEQGAPTSISNQLRDTLIESM 245

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eIF6NP_659573.1 PTZ00136 1..245 CDD:185471 151/245 (62%)
eif-6NP_493272.1 IF6 1..246 CDD:294171 151/245 (62%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160158524
Domainoid 1 1.000 271 1.000 Domainoid score I956
eggNOG 1 0.900 - - E1_COG1976
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H7135
Inparanoid 1 1.050 316 1.000 Inparanoid score I1525
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG62170
OrthoDB 1 1.010 - - D1157302at2759
OrthoFinder 1 1.000 - - FOG0003965
OrthoInspector 1 1.000 - - oto17698
orthoMCL 1 0.900 - - OOG6_101255
Panther 1 1.100 - - LDO PTHR10784
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R598
SonicParanoid 1 1.000 - - X2729
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1615.840

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