DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5554 and tmx4

DIOPT Version :9

Sequence 1:NP_001286784.1 Gene:CG5554 / 37775 FlyBaseID:FBgn0034914 Length:330 Species:Drosophila melanogaster
Sequence 2:NP_001025330.1 Gene:tmx4 / 792311 ZFINID:ZDB-GENE-050706-155 Length:277 Species:Danio rerio


Alignment Length:320 Identity:109/320 - (34%)
Similarity:170/320 - (53%) Gaps:65/320 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 AALLLLAATAQSTAAAQSGLQPGGKLIELDEDNWHLMLQGEWMIEFFAPWCPACKNLAPTWERFA 77
            |..|.||....:.|.|.:       ::.:.:.||.|:|||||||:|:|||||||::|...||...
Zfish    13 ALFLTLAGRGDAQADASN-------VVTVADANWTLILQGEWMIKFYAPWCPACQHLQADWENLG 70

  Fly    78 RVAKDVQVQVAKIDVTTSPSLSGRFFVTALPTIYHVKDGEFRQYRGARDGDALLYFVKKQQWQSI 142
            |.:..:.:.|.::|||..|.|||||.||.||||:|.|:|:||:|..:|..:.:..:|..::|.::
Zfish    71 RQSDSLGISVGRVDVTQQPGLSGRFLVTTLPTIFHAKNGDFRKYVSSRTIEDIQAYVVHRKWATV 135

  Fly   143 EPLSAWKKPDTTHMSVLSYFFKLSHTLK--HTQKLFKDFNGRLQEEYGLPTWGSYALFAIATIFV 205
            ||:..||.|.:..||.:::.|:||..::  ||.         |....|:|:||||.:|||.|:|:
Zfish   136 EPVPGWKSPSSLLMSGMAHLFRLSVWIRQIHTY---------LTNTLGIPSWGSYVIFAIITLFM 191

  Fly   206 GAALGLLLVCLVDFVYP--PKKSQRQSFSESQDNLTEGLEDLATEEIEDDGDAEENDDEQRDSDE 268
            |..|||:||.:.|.::|  ||:.|.|:....:::::|                          :|
Zfish   192 GLVLGLMLVLIADCIWPSRPKRRQDQTVVTVKEDVSE--------------------------EE 230

  Fly   269 EEQEDDDEEEEDSEEQVGDLATKEKEADSEPEKEEKPEPKQAGDAAPEKTEQVRKRKPRK 328
            ||::.|.|.|..|||     :|:|:.||:              ||..:....||:|...|
Zfish   231 EEEKQDLESERVSEE-----STEEETADA--------------DADTDAETTVRRRVQNK 271

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5554NP_001286784.1 PDI_a_TMX 36..136 CDD:239292 46/99 (46%)
tmx4NP_001025330.1 Thioredoxin_like 29..129 CDD:294274 46/106 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 90 1.000 Domainoid score I7770
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1481386at2759
OrthoFinder 1 1.000 - - FOG0006167
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR46107
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
77.020

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