DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5554 and Tmx1

DIOPT Version :10

Sequence 1:NP_001286784.1 Gene:CG5554 / 37775 FlyBaseID:FBgn0034914 Length:330 Species:Drosophila melanogaster
Sequence 2:NP_082615.1 Gene:Tmx1 / 72736 MGIID:1919986 Length:278 Species:Mus musculus


Alignment Length:289 Identity:109/289 - (37%)
Similarity:165/289 - (57%) Gaps:41/289 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 AALLLLAATAQSTAAAQSGLQPGGKLIELDEDNWHLMLQGEWMIEFFAPWCPACKNLAPTWERFA 77
            |||:||..........::.::      .|.::||..:|:|||||||:|||||||:||.|.||.||
Mouse    12 AALVLLLWAVPGAHGRRNNVR------VLTDENWTSLLEGEWMIEFYAPWCPACQNLQPEWESFA 70

  Fly    78 RVAKDVQVQVAKIDVTTSPSLSGRFFVTALPTIYHVKDGEFRQYRGARDGDALLYFVKKQQWQSI 142
            ...:|::|:|||:|||....|||||.:||||:|||.||||||:|.|.|.....:.||..::|::|
Mouse    71 EWGEDLEVKVAKVDVTEQTGLSGRFIITALPSIYHCKDGEFRRYVGPRTKKDFINFVSDKEWKNI 135

  Fly   143 EPLSAWKKPDTTHMSVLSYFFKLSHTLKHTQKLFKDFNGRLQEEYGLPTWGSYALFAIATIFVGA 207
            ||:|:|..|.:..|:::|..|:||..::.:...|       ..:.|:|.||||.:||.||:..|.
Mouse   136 EPISSWFGPSSVLMTMMSALFQLSVYIRTSHSYF-------VHDLGIPAWGSYLVFAFATVLSGL 193

  Fly   208 ALGLLLVCLVDFVYPPK--KSQRQSFSESQDNLTEGLEDLATEEIEDDGDAEENDDEQRDSDEEE 270
            .|||.::.:.|.:.|.|  |.|:|...::....::.|:.:                      |||
Mouse   194 LLGLCMIFVADCLCPSKRRKPQQQYAKKTSPEFSQPLKKV----------------------EEE 236

  Fly   271 QEDDDEE--EEDSEEQVGDLATKEKEADS 297
            ||.|:|:  ||::|::.|  |:|.....|
Mouse   237 QEADEEDVSEEEAEDREG--ASKATSQSS 263

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5554NP_001286784.1 PDI_a_TMX 36..136 CDD:239292 56/99 (57%)
Tmx1NP_082615.1 PDI_a_TMX 30..129 CDD:239292 56/104 (54%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 217..278 16/71 (23%)

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