DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5554 and pdia4

DIOPT Version :10

Sequence 1:NP_001286784.1 Gene:CG5554 / 37775 FlyBaseID:FBgn0034914 Length:330 Species:Drosophila melanogaster
Sequence 2:NP_956073.2 Gene:pdia4 / 554998 ZFINID:ZDB-GENE-030131-5493 Length:642 Species:Danio rerio


Alignment Length:287 Identity:71/287 - (24%)
Similarity:111/287 - (38%) Gaps:91/287 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 QPGGKLIELDEDNWHLMLQGE--WMIEFFAPWCPACKNLAPTWERFARVAK--DVQVQVAKIDVT 93
            :..|.|: |.:.|:...::|:  .::||:||||..||..||.:|:.|:..|  |..:.|||:|.|
Zfish    57 EENGVLV-LTDANFDTFIEGKDTVLVEFYAPWCGHCKQFAPEYEKIAQTLKENDPPIPVAKVDAT 120

  Fly    94 TSPSLSGRFFVTALPTIYHVKDGEFRQYRGARDGDALLYFVK---KQQWQS-------------- 141
            .:..|..||.|:..|||..:|.||...|.|.|...|::..||   :..|:.              
Zfish   121 KASGLGSRFEVSGYPTIKILKKGEPLDYDGDRSEHAIVERVKEVAQPDWKPPPEATLVLTKDNFD 185

  Fly   142 ----------IEPLSAW---------------------------KKPDTTHMSVLSYFFKLSHTL 169
                      :|..:.|                           .|.|.|..|.|:..|.:|.  
Zfish   186 DVVNNADIILVEFYAPWCGHCKRLAPEYEKAAKELSNRTPPIPLAKVDATAESDLATRFGVSG-- 248

  Fly   170 KHTQKLFK-----DFNGRLQEEYGLPTWGSYALFAIATIFVGAALGLLLVCLVDFVYPPKKSQRQ 229
            ..|.|:|:     |:||. :|::|:..:.|                       |...||.| |.|
Zfish   249 YPTLKIFRKGKAFDYNGP-REKFGIVDYMS-----------------------DQAGPPSK-QVQ 288

  Fly   230 SFSESQDNLTEGLEDLATEEIEDDGDA 256
            :..:.|:.|.:|.:.:.......|.||
Zfish   289 TLKQVQELLRDGDDAVIVGVFSSDEDA 315

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5554NP_001286784.1 PDI_a_TMX 36..136 CDD:239292 40/106 (38%)
pdia4NP_956073.2 pdi_dom 64..165 CDD:273454 38/100 (38%)
ER_PDI_fam 174..640 CDD:273457 30/169 (18%)

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