DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5554 and tmx3a

DIOPT Version :10

Sequence 1:NP_001286784.1 Gene:CG5554 / 37775 FlyBaseID:FBgn0034914 Length:330 Species:Drosophila melanogaster
Sequence 2:NP_001018393.2 Gene:tmx3a / 553578 ZFINID:ZDB-GENE-050522-396 Length:437 Species:Danio rerio


Alignment Length:258 Identity:67/258 - (25%)
Similarity:95/258 - (36%) Gaps:64/258 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 STAAAQSGLQPGGKLIELDEDNWHLMLQGE-WMIEFFAPWCPACKNLAPTWERFARVAKDV--QV 85
            |..|..||...|     || |.:....|.| |::||:||||..|....|.|.......|.:  .|
Zfish    14 SAIALVSGYVEG-----LD-DKFTEFRQNELWLVEFYAPWCAYCHTFEPVWTEVGAELKSLGSPV 72

  Fly    86 QVAKIDVTTSPSLSGRFFVTALPTIYHVKDGEFRQYRGARDGDALLYFVKKQQWQSIEPLSA--- 147
            .|.|||.|...|::..|.:...|||...|......|:|.|..|.::.|..:.....:.|||:   
Zfish    73 NVGKIDTTAHTSIATEFNIRGYPTIKLFKGDLSFDYKGPRTKDGIIEFTNRVSGPVVRPLSSVQL 137

  Fly   148 --------------------WKK---PDTTHMSVLSYFFKLSH-------TLKHTQ--KLFKDFN 180
                                .||   ...|...|.:|||..|.       ||:...  .:|||..
Zfish   138 FQHVMSRHDVIFVYIGGESLLKKEYYKAATEFIVHTYFFTASEEILPKAVTLQDVPAVAVFKDGT 202

  Fly   181 GRLQEEY---GLPTW------------GSYALFAIATIFVGAALGLLLVCLVDFVYPPKKSQR 228
            ..:..|:   .|.:|            .||:|:.     :|....|:.:.:||...|.::|.|
Zfish   203 YYIYNEFIDGDLSSWINRERFLSYFQIDSYSLYQ-----MGELSKLVALAVVDEKNPSEESIR 260

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5554NP_001286784.1 PDI_a_TMX 36..136 CDD:239292 33/102 (32%)
tmx3aNP_001018393.2 PDI_a_TMX3 22..125 CDD:239298 34/108 (31%)
ER_PDI_fam 27..>337 CDD:273457 61/240 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 398..437
Di-lysine motif. /evidence=ECO:0000255 434..437
Blue background indicates that the domain is not in the aligned region.

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