DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5554 and pdia8

DIOPT Version :10

Sequence 1:NP_001286784.1 Gene:CG5554 / 37775 FlyBaseID:FBgn0034914 Length:330 Species:Drosophila melanogaster
Sequence 2:NP_001003517.2 Gene:pdia8 / 445123 ZFINID:ZDB-GENE-040801-20 Length:493 Species:Danio rerio


Alignment Length:428 Identity:95/428 - (22%)
Similarity:146/428 - (34%) Gaps:160/428 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 LLLLAATAQSTAAAQSGLQPGGKLIELDEDNWHLMLQGE-WMIEFFAPWCPACKNLAPTWERFAR 78
            |.:|..:..|:|...|.:.   ||.:.|.|  :|..:.| .:::|:||||..||.|||.:|..|.
Zfish    10 LCILVCSLSSSAREHSDVL---KLTDADFD--YLAPEHETLLVKFYAPWCGHCKKLAPEFESAAS 69

  Fly    79 VAKDVQVQVAKIDVTTSPSLSGRFFVTALPTIYHVKDG-EFRQYRGARDGDALLYFVKKQQWQSI 142
            ..|.. |.:||:|.|.:..:...:.|...||:...::| |...|.|.|..|.::.::|||     
Zfish    70 RLKGT-VTLAKVDCTANTEICKHYGVNGYPTLKIFRNGHESSSYDGPRSADGIVDYMKKQ----- 128

  Fly   143 EPLSAWKKPDT--------------------------THMSVLSYF----------FKLSHT--L 169
                  ..||:                          |..|.|:.|          |:.:||  |
Zfish   129 ------AGPDSVLLHSELDLEKFINHFDASVVGLFSGTDSSQLAEFLKGASLMRESFRFAHTTDL 187

  Fly   170 KHTQK---------LFKDFNGRLQ---EEYGLPTWGSYALFAIATIFVGAALGL----------- 211
            :..||         ||:  ..||.   ||..:|..||.::..:.........||           
Zfish   188 QLGQKYGVTHESILLFR--APRLSSKFEESVVPHTGSLSVTGLRRFIRDNIFGLCPHMTKDNKEV 250

  Fly   212 -----LLVCL--VDFVYPPK----------------KSQRQSFSESQDNLTEGLEDLATEEIEDD 253
                 ||...  :|:::.||                .||...||.:..|      |. .||:|::
Zfish   251 LRKRDLLTAYYDLDYLHNPKGSNYWRNRVLKVATKFSSQGMLFSVANRN------DF-MEELEEE 308

  Fly   254 GDAEENDDEQ--------RDSD-----EEEQEDDDEEEEDSEEQVGD------------------ 287
            .....:|..:        |..|     ||...|....|...|:....                  
Zfish   309 FGLSASDGNELPFVTIRTRTGDKYSMREEFTRDGKSLESFLEDYFAGRLKRYVKSEPVPAINNGV 373

  Fly   288 ----LATKEKEADSEPEKE-------------EKPEPK 308
                :|...:|..::|||:             :|.|||
Zfish   374 VKVVVADTFEEIVNDPEKDVLIEFYAPWCGHCKKLEPK 411

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5554NP_001286784.1 PDI_a_TMX 36..136 CDD:239292 33/101 (33%)
pdia8NP_001003517.2 ER_PDI_fam 25..484 CDD:273457 91/413 (22%)

Return to query results.
Submit another query.