DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5554 and CG11790

DIOPT Version :10

Sequence 1:NP_001286784.1 Gene:CG5554 / 37775 FlyBaseID:FBgn0034914 Length:330 Species:Drosophila melanogaster
Sequence 2:NP_651326.1 Gene:CG11790 / 42999 FlyBaseID:FBgn0039265 Length:302 Species:Drosophila melanogaster


Alignment Length:218 Identity:45/218 - (20%)
Similarity:85/218 - (38%) Gaps:57/218 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 LQPGGKLIELDEDNWHLMLQ-------GEWMIEFFAPWCPACKNLAPTWERFARVAKDVQVQVAK 89
            |:|..|  ||.:||:..:.|       |:|.|.|.:..|..|:.|...||......|. ::.:|:
  Fly   122 LEPAVK--ELSDDNFEHLTQASSGATTGDWFIFFSSAECTVCQRLYAVWESVGGKLKR-KLNIAR 183

  Fly    90 ID-VTTSPSLSGRFFVTALPTIYHVKDGEFRQYRGAR-DGDALLYFVKKQQWQSIEPLSAWKKPD 152
            :: :.:..|.:.|..|...|....::.|:..:|...: ..:|.:.|.:|                
  Fly   184 MNSLESGISTATRLGVLEAPAFIFLRQGKMYKYSAKQYSPEAFVQFAEK---------------- 232

  Fly   153 TTHMSVLSYFFKLSHTLKHTQKL------FKDFNGRLQEEY---GLPTWGSYALFA-IATIFVGA 207
                         .:|..|.|.:      ..:|.|.||..:   .:.:..:.::|| :|.:|||.
  Fly   233 -------------GYTQSHPQPVPAIPSAVNEFLGPLQSYFAAENITSLATLSIFALVALLFVGK 284

  Fly   208 ALGLLLVCLVDFVYPPKKSQRQS 230
            .:..:      |...|.|::.:|
  Fly   285 KVAKI------FSSEPAKTKNKS 301

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5554NP_001286784.1 PDI_a_TMX 36..136 CDD:239292 25/108 (23%)
CG11790NP_651326.1 PTZ00102 27..>174 CDD:240266 17/53 (32%)
PTZ00443 125..302 CDD:185622 43/215 (20%)

Return to query results.
Submit another query.