DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5554 and pdia2

DIOPT Version :10

Sequence 1:NP_001286784.1 Gene:CG5554 / 37775 FlyBaseID:FBgn0034914 Length:330 Species:Drosophila melanogaster
Sequence 2:NP_001307463.1 Gene:pdia2 / 394023 ZFINID:ZDB-GENE-040426-705 Length:555 Species:Danio rerio


Alignment Length:244 Identity:49/244 - (20%)
Similarity:79/244 - (32%) Gaps:118/244 - (48%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 IEFFAPWCPACKNLAPTWERFARVAKDVQ-VQVAKIDVTTS--PSLSGRFFVTALPTIYHVKDGE 117
            :||:||||..|:.|||.|:......||.: :.:||:|.|.:  ..|:    :...|||.:...| 
Zfish   425 VEFYAPWCGHCQQLAPVWDELGEKYKDQENIIIAKMDATENDVEDLT----IQGFPTIKYFPAG- 484

  Fly   118 FRQYRGARDGDALLYFVKKQQWQSIEPLSAWKKPDTTHMSVLSYFFKLSHTLKHTQKLFKDFNGR 182
                                                                  |:|...|::|.
Zfish   485 ------------------------------------------------------TEKKIVDYDGN 495

  Fly   183 LQEEYGLPTWGSYALFAIATIFVGAALGLLLVCLVDFVYPPKKSQRQSFSESQDNLTEGLEDLAT 247
            ...|                                           :||:..||  .|:  |..
Zfish   496 RDLE-------------------------------------------TFSKFLDN--GGV--LPK 513

  Fly   248 EEIEDDGDAEENDDEQRDSDEEEQEDDDEEEEDSEEQVGDLATKEKEAD 296
            ||.::|   |::||:..|.|:|::..|:.:||..:      ||.|.:.|
Zfish   514 EESKED---EDDDDDDNDDDDEDKPTDESKEESPK------ATNETDKD 553

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5554NP_001286784.1 PDI_a_TMX 36..136 CDD:239292 22/82 (27%)
pdia2NP_001307463.1 ER_PDI_fam 56..512 CDD:273457 32/192 (17%)

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