DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5554 and pdia3

DIOPT Version :10

Sequence 1:NP_001286784.1 Gene:CG5554 / 37775 FlyBaseID:FBgn0034914 Length:330 Species:Drosophila melanogaster
Sequence 2:NP_001186666.1 Gene:pdia3 / 378851 ZFINID:ZDB-GENE-031002-9 Length:494 Species:Danio rerio


Alignment Length:202 Identity:55/202 - (27%)
Similarity:91/202 - (45%) Gaps:43/202 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 ALLLLAATAQSTAAAQSGLQPGGKLIELDEDNW------HLMLQGEWMIEFFAPWCPACKNLAPT 72
            |||.|.|.|.:..|:.        ::|..:|::      |.::    ::|||||||..||.|||.
Zfish     4 ALLFLVAFAAAARASD--------VLEYTDDDFDSRIGDHDLI----LVEFFAPWCGHCKRLAPE 56

  Fly    73 WERFARVAKDVQVQVAKIDVTTSPSLSGRFFVTALPTIYHVKDGE-FRQYRGARDGDALLYFVKK 136
            :|..|...|.: |.:||:|.|.:..:.|::.|:..||:...:||| ...|.|.|..|.::..:||
Zfish    57 YEAAATRLKGI-VPLAKVDCTANSKVCGKYGVSGYPTLKIFRDGEDSGGYDGPRTADGIVSHLKK 120

  Fly   137 QQWQSIEPLSAWKKPDT--------THMSVLSY-----------FFKLSHTLKHTQKLFKDFNGR 182
            |    ..|.|...|.:.        ...||:.:           |.|.:..|:.:.:.....|..
Zfish   121 Q----AGPASVELKNEADFEKYIGDRDASVVGFFADGGSAAQGEFLKAASALRESYRFAHTNNED 181

  Fly   183 LQEEYGL 189
            |.:::|:
Zfish   182 LLKKHGI 188

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5554NP_001286784.1 PDI_a_TMX 36..136 CDD:239292 34/106 (32%)
pdia3NP_001186666.1 ER_PDI_fam 18..475 CDD:273457 48/188 (26%)

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