DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5554 and Tmx3

DIOPT Version :10

Sequence 1:NP_001286784.1 Gene:CG5554 / 37775 FlyBaseID:FBgn0034914 Length:330 Species:Drosophila melanogaster
Sequence 2:XP_061506938.1 Gene:Tmx3 / 1276128 VectorBaseID:AGAMI1_003374 Length:434 Species:Anopheles gambiae


Alignment Length:182 Identity:47/182 - (25%)
Similarity:80/182 - (43%) Gaps:24/182 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MHSTSYFVAATCAALLLLAATAQSTAAAQSGLQPGGKLIELDEDNWHLMLQGEWMIEFFAPWCPA 65
            |..:|.||......|:|..|....|::         :::||.:....:..:|:|.:.|:||||..
Mosquito     1 MIPSSLFVKYISDDLILSLARVTGTSS---------RVLELSDRFLDVRNEGQWFVMFYAPWCAH 56

  Fly    66 CKNLAPTWERFARVAKDVQVQVAKIDVTTSPSLSGRFFVTALPTIYHVKDGEFRQYRGARDGDAL 130
            ||.|.|.|...|:...:..::|.::|.|...:::..|.|.|.|||..||......|.|.|..:.|
Mosquito    57 CKKLEPVWALVAQALYNTNIRVGRVDCTRFTAVAQHFKVNAYPTIIFVKGPYDYVYNGERSKEEL 121

  Fly   131 LYFVKKQQWQSIEPLSAWKKPDTTHMSVLSYFFKLSHTLKHTQKLFKDFNGR 182
            ::||.:   .|..|:....:.|:..:            ||....:|..:.|:
Mosquito   122 IHFVNR---MSGPPVQLVTRADSIDI------------LKSNNPIFFTYVGK 158

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5554NP_001286784.1 PDI_a_TMX 36..136 CDD:239292 32/99 (32%)
Tmx3XP_061506938.1 None

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