DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5554 and Pdia4

DIOPT Version :10

Sequence 1:NP_001286784.1 Gene:CG5554 / 37775 FlyBaseID:FBgn0034914 Length:330 Species:Drosophila melanogaster
Sequence 2:NP_446301.2 Gene:Pdia4 / 116598 RGDID:619835 Length:643 Species:Rattus norvegicus


Alignment Length:353 Identity:77/353 - (21%)
Similarity:125/353 - (35%) Gaps:137/353 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 LLLLAATAQSTAAA------------QSGLQPGGKLIELDEDNWHLMLQ---GEW---------- 54
            |:||.|..|..|||            ::.::......|.:||...|.::   |.|          
  Rat     9 LVLLLALTQLLAAASAEDAHEDASDSENPIEDDDDEEEDEEDEDDLEVKEENGVWVLNDENFDNF 73

  Fly    55 -------MIEFFAPWCPACKNLAPTWERFARVAK--DVQVQVAKIDVTTSPSLSGRFFVTALPTI 110
                   ::||:||||..||..||.:|:.|...|  |..:.|||||.|::..|:.:|.|:..|||
  Rat    74 VADKDTVLLEFYAPWCGHCKQFAPEYEKIASTLKDNDPPIAVAKIDATSASMLASKFDVSGYPTI 138

  Fly   111 YHVKDGEFRQYRGARDGDALLYFVK---KQQWQS------------------------IEPLSAW 148
            ..:|.|:...|.|:|..:.::..|:   :..|..                        :|..:.|
  Rat   139 KILKKGQAVDYDGSRTQEEIVAKVREVSQPDWTPPPEVTLTLTKENFDDVVNNADIILVEFYAPW 203

  Fly   149 ---------------------------KKPDTTHMSVLSYFFKLSHTLKHTQKLFK-----DFNG 181
                                       .|.|.|..:.|:..|.:|.  ..|.|:|:     |:||
  Rat   204 CGHCKKLAPEYEKAAKELSKRSPPIPLAKVDATEQTDLAKRFDVSG--YPTLKIFRKGRPFDYNG 266

  Fly   182 RLQEEYGLPTWGSYALFAIATIFVGAALGLLLVCLVDFVY----PPKK-----SQRQSFSESQDN 237
            . :|:||                           :||::.    ||.|     .|.|.|.:..|:
  Rat   267 P-REKYG---------------------------IVDYMVEQSGPPSKEILTLKQVQEFLKDGDD 303

  Fly   238 LT-----EGLEDLATEEIEDDGDAEEND 260
            :.     :|:.|....:.:|..:....|
  Rat   304 VVILGVFQGVGDPGYLQYQDAANTLRED 331

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5554NP_001286784.1 PDI_a_TMX 36..136 CDD:239292 38/124 (31%)
Pdia4NP_446301.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 24..58 4/33 (12%)
pdi_dom 65..166 CDD:273454 32/100 (32%)
CXXC. /evidence=ECO:0000250|UniProtKB:P08003 89..92 1/2 (50%)
ER_PDI_fam 175..635 CDD:273457 30/187 (16%)
CXXC. /evidence=ECO:0000250|UniProtKB:P08003 553..556
Prevents secretion from ER 640..643
Blue background indicates that the domain is not in the aligned region.

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