DRSC/TRiP Functional Genomics Resources

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Protein Alignment Snap29 and snap29

DIOPT Version :9

Sequence 1:NP_523831.1 Gene:Snap29 / 37774 FlyBaseID:FBgn0034913 Length:284 Species:Drosophila melanogaster
Sequence 2:NP_001243185.1 Gene:snap29 / 553460 ZFINID:ZDB-GENE-041111-226 Length:266 Species:Danio rerio


Alignment Length:274 Identity:89/274 - (32%)
Similarity:129/274 - (47%) Gaps:48/274 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 RSTNPFEMD----------------DDDEEEITSSPSVAAQRLAYAEKRRAIEQRTLDSTNKSLG 90
            :|.|||..|                |||.||.:.||:...||....|..|. .|..:||:::|||
Zfish     6 KSHNPFADDDEEEDSRAAPRRGFNFDDDPEESSLSPAERRQRQLQQEVMRT-AQSAVDSSHRSLG 69

  Fly    91 LLYETQEVGKATAVELAKQREQLEKTSHQLDEISSTLRFSQRHLTGLKSVFGGLKNYLSGNRDQP 155
            |:||:::||..||.||.:|.|.|::|...:|.:...:|.||||:..:|||:||:.||..|..:.|
Zfish    70 LIYESEKVGAETAEELIRQGEALKRTERMIDNMEQDMRTSQRHINTIKSVWGGMVNYFKGKPEPP 134

  Fly   156 -PTATGSPTGSQSS-----------------QEANSNINQGACGGASPSAPLSPAERYDNHPVSQ 202
             |.....|...::|                 |.::.|:.:....|...||.|      ||....|
Zfish   135 KPAQKDQPVCYEASSRLQTALAESKQQEDKYQASHPNLRKLETSGFGASAAL------DNGSSDQ 193

  Fly   203 LRGDPSSTYQPQRQAANPFQAQIDSNLEEMCSNLSVLKMLATDLGGEIESQNELLDNMNYKIEDV 267
             .|.|.:   .|.:||:   .|:|.||:||...|..||.|...|..||:.|:..||.:..|.:.:
Zfish   194 -NGFPKN---KQLRAAH---QQLDRNLDEMSLGLGRLKNLGLGLQTEIDEQDISLDALLNKADTM 251

  Fly   268 DLKIHKQNKDMSKL 281
            |.||...|:.:..|
Zfish   252 DGKISSTNRQLKSL 265

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Snap29NP_523831.1 SNARE_SNAP29N 72..136 CDD:277240 27/63 (43%)
SNARE_SNAP29C 222..280 CDD:277209 21/57 (37%)
snap29NP_001243185.1 SNARE_SNAP29N 51..115 CDD:277240 27/64 (42%)
SNARE_SNAP29C 206..263 CDD:277209 21/59 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170592311
Domainoid 1 1.000 112 1.000 Domainoid score I6171
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H3512
Inparanoid 1 1.050 112 1.000 Inparanoid score I4845
OMA 1 1.010 - - QHG48584
OrthoDB 1 1.010 - - D1358184at2759
OrthoFinder 1 1.000 - - FOG0007247
OrthoInspector 1 1.000 - - oto40639
orthoMCL 1 0.900 - - OOG6_106569
Panther 1 1.100 - - LDO PTHR19305
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X6123
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1312.910

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