DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Snap29 and snap25a

DIOPT Version :9

Sequence 1:NP_523831.1 Gene:Snap29 / 37774 FlyBaseID:FBgn0034913 Length:284 Species:Drosophila melanogaster
Sequence 2:NP_571510.1 Gene:snap25a / 30712 ZFINID:ZDB-GENE-980526-468 Length:204 Species:Danio rerio


Alignment Length:244 Identity:53/244 - (21%)
Similarity:99/244 - (40%) Gaps:57/244 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 DDDDEEEITSSPSVAAQRLAYAEKRRAIEQRTLDSTNKSLGLLYETQEVGKATAVELAKQREQLE 114
            |.|...|:......|.|          :...:|:||.:.|.|:.|:::.|..|.|.|.:|.||||
Zfish     4 DSDMRNELADMQQRADQ----------LADESLESTRRMLQLVEESKDAGIRTLVMLDEQGEQLE 58

  Fly   115 KTSHQLDEISSTLRFSQRHLTGLKSVFGGLKNYLSGNRDQPPTATGSPTGSQSSQEANSNINQGA 179
            :....:|:|:..::.::::|..| ..|.||              ...|.....|           
Zfish    59 RIEEGMDQINKDMKDAEKNLNDL-GKFCGL--------------CSCPCNKMKS----------- 97

  Fly   180 CGGASPSAPLSPAERYDNHPVSQLRGDPSSTYQPQRQAA-----------NPFQAQIDSNLEEMC 233
              |||        :.:.|:....:...|:.....:.|.|           :..:.::|.|||::.
Zfish    98 --GAS--------KAWGNNQDGVVASQPARVVDEREQMAISGGFIRRVTDDARENEMDENLEQVG 152

  Fly   234 SNLSVLKMLATDLGGEIESQNELLDNMNYKIEDVDLKIHKQNKDMSKLL 282
            ..:..|:.:|.|:|.||::||..:|.:..|.:....:..:.|:..:|:|
Zfish   153 GIIGNLRHMALDMGNEIDTQNRQIDRIMEKADSNKTRFDEANQRATKML 201

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Snap29NP_523831.1 SNARE_SNAP29N 72..136 CDD:277240 18/63 (29%)
SNARE_SNAP29C 222..280 CDD:277209 15/57 (26%)
snap25aNP_571510.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..25 5/30 (17%)
SNARE_SNAP25N 10..82 CDD:277247 22/82 (27%)
SNAP-25 91..139 CDD:279208 9/68 (13%)
SNARE_SNAP25C 141..199 CDD:277238 15/57 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3065
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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