DRSC/TRiP Functional Genomics Resources

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Protein Alignment GlyT and slc6a3

DIOPT Version :9

Sequence 1:NP_611836.2 Gene:GlyT / 37772 FlyBaseID:FBgn0034911 Length:1188 Species:Drosophila melanogaster
Sequence 2:NP_571830.1 Gene:slc6a3 / 80787 ZFINID:ZDB-GENE-010316-1 Length:629 Species:Danio rerio


Alignment Length:638 Identity:261/638 - (40%)
Similarity:373/638 - (58%) Gaps:69/638 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 SSKSGSAGVGG--------VGGGGGVVCPSTAISGCASGTALIQLDATGPGAGG-------AGES 53
            ||.|||:...|        |....||...|:::              ..|||..       ...|
Zfish    22 SSVSGSSSAAGPREVELVLVKEQNGVQFTSSSL--------------RNPGAHSHTHTHTHTHPS 72

  Fly    54 EHERGTWTGRFDFLLSLLGYSVGLGNVWRFPYLCYNNGGGAFLIPFTIMLVIAGLPLMFMELSFG 118
            ..:|.||..:.|||||::|::|.|.||||||||||.|||||||:|:.:.:||||:||.:|||:.|
Zfish    73 GQQRETWGKKIDFLLSVIGFAVDLANVWRFPYLCYKNGGGAFLVPYLLFMVIAGMPLFYMELALG 137

  Fly   119 QYAALGPVAVYRRFCPLFRGLGTGMILVSAIVMLYYNLIIAWTIFYMFASFAPVLPWQNCEPAWS 183
            ||...|...|: :.||:|:|:|..:||:|..|..|||:||||.:||:|:||:..|||.:|...|:
Zfish   138 QYNREGAAGVW-KICPIFKGVGFTVILISLYVGSYYNVIIAWALFYLFSSFSGELPWIHCNNTWN 201

  Fly   184 TKYCFSYAQADQCEAT--NGTYYLRTCHNATSAAENNITTLALGALKRPPAEEYFNNFVLGL--S 244
            :..|      ....||  |.||                        |..||.|||...||.:  |
Zfish   202 SPNC------SDPNATLLNDTY------------------------KTTPALEYFERGVLHVHES 236

  Fly   245 KGIEETGSIKLSLAACLFLAWTIVFLCLCKGVQSSGKVVYFTALFPYVVLVILFVRGVTLPGAST 309
            .||::.|:.:..|.|||.:...:::..|.|||::|||||:.||..|||||.:|.:||||||||..
Zfish   237 SGIDDLGAPRWQLTACLAVVIVVLYFSLWKGVKTSGKVVWITATMPYVVLTVLLLRGVTLPGAID 301

  Fly   310 GILFYLTPDWKQLANAQVWGDAAVQIFFALSPAWGGLITLSSYNKFSNNCYKDSLIVAFCNIATS 374
            ||..||:.|:.:|.:||||.:||.||.|:|...:|.||..|||||||||||:|::|.:..|..||
Zfish   302 GIKAYLSVDFLRLYDAQVWIEAATQICFSLGVGFGVLIAFSSYNKFSNNCYRDAIITSSINSLTS 366

  Fly   375 FFAGLVIFSIIGFLAHELNVDVEKVVDQGAGLAFIVYPEVVTRLPVSPVWAVLFFVMLLTLGLDS 439
            ||:|.||||.:|:::.:.||.::||...|.||.||:|||.:..||.|.||||:||:||||||:||
Zfish   367 FFSGFVIFSFLGYMSQKHNVALDKVATDGPGLVFIIYPEAIATLPGSSVWAVIFFIMLLTLGIDS 431

  Fly   440 QFALMETVTTAILDRFPNLRQYKIWVVLSVAIFGYIGGLGFTTNSGMYWLQLMDKYAANWSVLLI 504
            ....||:|.|.::|.|..|.:::....|.:.:..::..|...||.|:|...|:|.:||..|:|..
Zfish   432 AMGGMESVITGLIDEFKFLHKHRELFTLFIVVSTFLISLICVTNGGIYVFTLLDHFAAGTSILFG 496

  Fly   505 AISECILIAWIYGSQRFLNDIQGMIGKRSWFWNFFWGIMWRYITPATLLFILFFNWVEYKPAKYG 569
            .:.|.|.|||.||..||.:||:.|||:|.   ..:|.:.|::::|..|||::..::..:.|.|||
Zfish   497 VLIEAIGIAWFYGVDRFSDDIEEMIGQRP---GLYWRLCWKFVSPCFLLFMVVVSFATFNPPKYG 558

  Fly   570 HYVYPMWADAVGWIVGLLPVLVIFLVAFQEIWRAPMSLSFRDRIKHLLQPTAE 622
            .|.:|.||..|||.:.:..::::.|.||.:....|.  ||.|::.:.:.|..:
Zfish   559 SYYFPTWATMVGWCLSISSMIMVPLYAFYKFCSLPG--SFCDKLAYAITPETD 609

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GlyTNP_611836.2 SNF 57..603 CDD:249680 242/549 (44%)
slc6a3NP_571830.1 SLC6sbd_DAT1 76..623 CDD:212083 247/570 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.820

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