DRSC/TRiP Functional Genomics Resources

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Protein Alignment GlyT and slc6a17

DIOPT Version :9

Sequence 1:NP_611836.2 Gene:GlyT / 37772 FlyBaseID:FBgn0034911 Length:1188 Species:Drosophila melanogaster
Sequence 2:NP_001243653.1 Gene:slc6a17 / 798635 ZFINID:ZDB-GENE-030131-8187 Length:730 Species:Danio rerio


Alignment Length:703 Identity:224/703 - (31%)
Similarity:339/703 - (48%) Gaps:162/703 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 IQLDATGPGAGGAG------ESEHERGTWTGRFDFLLSLLGYSVGLGNVWRFPYLCYNNGGGAFL 96
            :.::.||..|...|      :.|..|..|..:..::|:.:|:||||||||||||||..|||||:|
Zfish    38 MSMNMTGGSAPPIGKPDISPDLEDGRPAWNSKLQYILAQVGFSVGLGNVWRFPYLCQKNGGGAYL 102

  Fly    97 IPFTIMLVIAGLPLMFMELSFGQYAALGPVAVYRRFCPLFRGLGTGMILVSAIVMLYYNLIIAWT 161
            :|:.|:|::.|:||.|:||:.||....|.:.|:...||...|:|...::|...|.||||:||.|:
Zfish   103 VPYFILLILIGIPLFFLELAVGQRIRRGSIGVWNYVCPRLGGIGASSLMVCGFVGLYYNVIIGWS 167

  Fly   162 IFYMFASFAPVLPWQNC-----------EPAWSTKYCFSYAQADQCEATNGTYYLRTCHNATSAA 215
            |||.|.||...|||.:|           ||              :||.::.|.|           
Zfish   168 IFYFFQSFQYPLPWSDCPIRKNGSQAIVEP--------------ECEKSSATTY----------- 207

  Fly   216 ENNITTLALGALKRPPAEEYFNNFVLGLSKGIEETGSIKLSLAACLFLAWTIVFLCLCKGVQSSG 280
                               ::....|.::..|.::|.:...:...|..||.||.|.:.||:||||
Zfish   208 -------------------FWYRETLNITSTIADSGGLNWRMTLSLLAAWIIVCLAVIKGIQSSG 253

  Fly   281 KVVYFTALFPYVVLVILFVRGVTLPGASTGILFYLTPDWKQLANAQVWGDAAVQIFFALSPAWGG 345
            ||:||::|||||||....|||:.|.||..||....||..:.:...|||.:||.|:||||...:||
Zfish   254 KVMYFSSLFPYVVLFCFLVRGLFLKGAVDGIAHMFTPKLEIMLEPQVWREAATQVFFALGLGFGG 318

  Fly   346 LITLSSYNKFSNNCYKDSLIVAFCNIATSFFAGLVIFSIIGFLAHELN-----VDVEKVVD---- 401
            :|..|||||..|||:.|:::|:..|..||..|.||:|:::||.|:.:|     .:.||::.    
Zfish   319 VIAFSSYNKRDNNCHFDAVLVSVINFLTSILATLVVFAVLGFKANIMNEKCVVENAEKILGYLNS 383

  Fly   402 -------------------------------------------------------QGAGLAFIVY 411
                                                                   ||.|||||.:
Zfish   384 NVLSHDLIPPHVNFSHLTTSDYAEMYGVIKIVKEDSFAQLGLEQCLLEDELNKAVQGTGLAFIAF 448

  Fly   412 PEVVTRLPVSPVWAVLFFVMLLTLGLDSQFALMETVTTAILDRFPNLRQYKIWVVLSVAIFGYIG 476
            .|.:|..|.||.|:|:||.||:.|||.|....|..:||.|||.|...::|   :.:...|..::.
Zfish   449 TEAMTHFPASPFWSVMFFFMLINLGLGSMIGTMTGITTPILDTFKIRKEY---LTVGCCIVAFLC 510

  Fly   477 GLGFTTNSGMYWLQLMDKYAANWSVLLIAISECILIAWIYGSQRFLNDIQGMIGKRSWFWNFFWG 541
            ||.|...||.|::.:.|.|:|...:.::.|.|.:.:|||||::||:.|::.|:|.|.:...|:  
Zfish   511 GLLFVQRSGNYFVTMFDDYSAGLPLTIVVILENVSVAWIYGTKRFMQDLEDMLGFRPYSVYFY-- 573

  Fly   542 IMWRYITPATLLFILFFNWVE--YKPAKYGHYV----------YPMWADAVGW---IVGLLPVLV 591
             :|:|::|..|:.::..:.||  ..|..|..:|          ||.||..:.:   ||.:||:.:
Zfish   574 -LWKYVSPVCLIILISASVVEMAISPLGYNAWVQDLAMERFQSYPPWAIVMCFALIIVAMLPLPL 637

  Fly   592 IFLVAFQEIW----RAPMSLSFR-----------DRIKHLLQPTAEWGPAGRP 629
            :| :|....|    ...:|:|:|           |..:.:|.......|:..|
Zfish   638 VF-IARHFNWLPDGSNKLSVSYRKSLAKEASTLEDETRFILGKNPSEAPSPMP 689

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GlyTNP_611836.2 SNF 57..603 CDD:249680 212/639 (33%)
slc6a17NP_001243653.1 SLC5-6-like_sbd 63..651 CDD:294310 212/638 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.920

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