DRSC/TRiP Functional Genomics Resources

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Protein Alignment GlyT and slc6a13

DIOPT Version :9

Sequence 1:NP_611836.2 Gene:GlyT / 37772 FlyBaseID:FBgn0034911 Length:1188 Species:Drosophila melanogaster
Sequence 2:NP_001072913.1 Gene:slc6a13 / 780375 XenbaseID:XB-GENE-5947897 Length:601 Species:Xenopus tropicalis


Alignment Length:617 Identity:248/617 - (40%)
Similarity:356/617 - (57%) Gaps:61/617 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 GESEHERGTWTGRFDFLLSLLGYSVGLGNVWRFPYLCYNNGGGAFLIPFTIMLVIAGLPLMFMEL 115
            |:...|||.|..:.:|:||:.|..:|||||||||||||.||||||.||:.|.|...|:|:.|:|.
 Frog    31 GDMMIERGQWNNKVEFVLSVAGEIIGLGNVWRFPYLCYKNGGGAFFIPYLIFLFTCGIPVFFLET 95

  Fly   116 SFGQYAALGPVAVYRRFCPLFRGLGTGMILVSAIVMLYYNLIIAWTIFYMFASFAPVLPWQNCEP 180
            :.|||.:.|.|..:|:.||||.|:|....::..::..||.:::||.:||:|.||...|||.:|..
 Frog    96 ALGQYTSQGGVTAWRKICPLFEGIGYSSQVIVMLLNCYYIVVLAWALFYLFNSFTSELPWASCGH 160

  Fly   181 AWSTKYCFSYAQADQCEATNGTYYLRTCHNATSAAENNITTLALGALKRPPAEEYFNNFVLGLSK 245
            :|:|:.|..:            |...:.||.|....:::.             |::...||.:|.
 Frog   161 SWNTENCLDF------------YKGNSTHNVTLNGTSSVI-------------EFWERRVLRISD 200

  Fly   246 GIEETGSIKLSLAACLFLAWTIVFLCLCKGVQSSGKVVYFTALFPYVVLVILFVRGVTLPGASTG 310
            ||:..|.:...||.||.|||.|.:.|:.|||:|:||||||||.|||::|::|.:|||:||||.||
 Frog   201 GIDNIGGLHWELALCLLLAWIICYFCIWKGVKSTGKVVYFTATFPYLMLIVLLIRGVSLPGALTG 265

  Fly   311 ILFYLTPDWKQLANAQVWGDAAVQIFFALSPAWGGLITLSSYNKFSNNCYKDSLIVAFCNIATSF 375
            |.|||.||..:|.:.|||.||..||||:.:...|.|..|.||||::||||:|.:.:.|.|..|||
 Frog   266 IQFYLYPDLSRLQDPQVWMDAGTQIFFSYAICLGCLTALGSYNKYNNNCYRDCVALCFLNSGTSF 330

  Fly   376 FAGLVIFSIIGFLAHELNVDVEKVVDQGAGLAFIVYPEVVTRLPVSPVWAVLFFVMLLTLGLDSQ 440
            .||..||||:||:|.|..|.:..|.:.|.|||||.||..|:.:|.||:||..||.|::.||||||
 Frog   331 VAGFAIFSILGFMAEEQGVHISDVAESGPGLAFIAYPRAVSMMPFSPLWACFFFFMVILLGLDSQ 395

  Fly   441 FALMETVTTAILDRFPNL---RQYKIWVVLSVAIFGYIGGLGFTTNSGMYWLQLMDKYAANWSVL 502
            |..:|::.||::|.:|.:   :..:..::|.|::..::.||...|..|||..||.|.|||:...|
 Frog   396 FVCVESLVTAVVDMYPTIFRKKNRRELLILGVSMISFLVGLIMLTEGGMYVFQLFDYYAASGMCL 460

  Fly   503 L-IAISECILIAWIYGSQRFLNDIQGMIGKRSWFWNFFWGIM---WRYITPATLLFILFFNWVEY 563
            | :||.|.:.:.|:||:..|.:.::.|||.|.      .||:   |.::|||..:....|:.|:|
 Frog   461 LFVAIFETLCVGWVYGADNFYDKVEHMIGYRP------TGIIKYCWLFVTPAVCMATFLFSLVKY 519

  Fly   564 KPAKYG-HYVYPMWADAVGWIVGLLPVLVIFLVAFQEIW----RAPMSLSFRDRIKHLLQPTAEW 623
            .|..|. |||||.|.||:||::.|..::.|      .:|    .:.:..|..:|.:.|..|..:.
 Frog   520 TPLTYNKHYVYPWWGDAIGWLLALSSMVCI------PLWVGYKLSTIKGSLMERFRQLTFPDPDL 578

  Fly   624 GPAGRPCVNLHAERYQSQNYDGVTNTKILIEE 655
             |....|..|      ||...|.     |:||
 Frog   579 -PQKTQCEPL------SQTAQGT-----LLEE 598

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GlyTNP_611836.2 SNF 57..603 CDD:249680 233/557 (42%)
slc6a13NP_001072913.1 SLC5-6-like_sbd 37..579 CDD:382020 237/579 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 1 1.000 - - FOG0000575
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
33.010

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