DRSC/TRiP Functional Genomics Resources

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Protein Alignment GlyT and slc6a1a

DIOPT Version :9

Sequence 1:NP_611836.2 Gene:GlyT / 37772 FlyBaseID:FBgn0034911 Length:1188 Species:Drosophila melanogaster
Sequence 2:NP_001038752.2 Gene:slc6a1a / 692318 ZFINID:ZDB-GENE-060519-23 Length:679 Species:Danio rerio


Alignment Length:691 Identity:269/691 - (38%)
Similarity:389/691 - (56%) Gaps:89/691 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 ERGTWTGRFDFLLSLLGYSVGLGNVWRFPYLCYNNGGGAFLIPFTIMLVIAGLPLMFMELSFGQY 120
            :|.||.|:||||||.:||::||||||||||||..|||||||||:.:.|:.||:||.|:|.:.|||
Zfish    42 DRETWGGKFDFLLSCVGYAIGLGNVWRFPYLCGKNGGGAFLIPYFLTLIFAGVPLFFLECALGQY 106

  Fly   121 AALGPVAVYRRFCPLFRGLGTGMILVSAIVMLYYNLIIAWTIFYMFASFAPVLPWQNCEPAWSTK 185
            .::|.:.|: :..|:|:|:|....::|..:.:||.:||||.::|::.||...|||::|...|:|.
Zfish   107 TSIGGLGVW-KLAPMFKGVGLAAAVLSFWLNIYYIVIIAWALYYLYNSFTTDLPWKSCNNPWNTD 170

  Fly   186 YCFSYAQADQCEATNGTYYLRTCHNATSAAENNITTLALGALKRPPAEEYFNNFVLGLSKGIEET 250
            .|:          ||  |.:....|.|||                 ..|::...|..::.|:|:.
Zfish   171 RCY----------TN--YSIVDTTNLTSA-----------------VMEFWERNVHQMTDGLEKP 206

  Fly   251 GSIKLSLAACLFLAWTIVFLCLCKGVQSSGKVVYFTALFPYVVLVILFVRGVTLPGASTGILFYL 315
            |.|::.||..|.:||.:|:.|:.|||..:||||||:|.:||.:|.|||:||||||||..|||||:
Zfish   207 GEIRVPLAITLAIAWVLVYFCIWKGVSWTGKVVYFSATYPYFMLFILFIRGVTLPGAKEGILFYI 271

  Fly   316 TPDWKQLANAQVWGDAAVQIFFALSPAWGGLITLSSYNKFSNNCYKDSLIVAFCNIATSFFAGLV 380
            |||:::|..::||.|||.||||:.....|.||.|.|||.|:||.|:||:||...|..||.|||.|
Zfish   272 TPDFEKLKESEVWLDAATQIFFSYGLGLGSLIALGSYNPFNNNVYRDSIIVCCINSFTSMFAGFV 336

  Fly   381 IFSIIGFLAHELNVDVEKVVDQGAGLAFIVYPEVVTRLPVSPVWAVLFFVMLLTLGLDSQFALME 445
            ||||:||::|.....:..|...|.||||:.|||.||:|||||:||:|||.|||.||:||||..:|
Zfish   337 IFSIVGFMSHVTKRPIADVAASGPGLAFLAYPEAVTQLPVSPLWAILFFSMLLMLGIDSQFCTVE 401

  Fly   446 TVTTAILDRFPN-LRQYKIWVVLSVAIFGYIGGLGFTTNSGMYWLQLMDKYAANWSVLL-IAISE 508
            ...||::|.||. ||:.:...:..|.:..|..||...|..|:|..:|.|.|:|:...|| :...|
Zfish   402 GFITALVDEFPRLLRKRREIFIACVCVVSYAIGLSNITQGGLYVFKLFDYYSASGMCLLFLVFFE 466

  Fly   509 CILIAWIYGSQRFLNDIQGMIGKRSWFWNFFWGIMWRYITPATLLFILFFNWVEYKPAKYGHYVY 573
            ||.|:|.||..:|.::||.|||.:...|   |.:.|.:.||..:..:..|:.|:..|....:||:
Zfish   467 CISISWCYGVNKFYDNIQEMIGYKPCIW---WKLCWVFFTPLVVAGVFLFSAVQMVPLTMNNYVF 528

  Fly   574 PMWADAVGWIVGLLPVLVI-------FLVAFQEIWRAPMSLSFRDRIKHLLQPTA-----EWGPA 626
            |.|...|||::.|..:::|       ||         .:..::::||:.:|||.|     |.|| 
Zfish   529 PKWGQGVGWLMALSSMVLIPGYMGYMFL---------NLKGTYKERIRIMLQPPAVKRAQENGP- 583

  Fly   627 GRPCVNLHAERYQSQNYDGVTNTKILIEEEASPKQAANKKDRQLTLDVDVDVECLPLATVGKRPG 691
                     |:.|||       ..|   :|.||:|..:.:..|..|.             .:.|.
Zfish   584 ---------EQQQSQ-------PPI---QEQSPQQPQSPQQPQSPLQ-------------PQSPQ 616

  Fly   692 APKSMGKQGSSGNLQTNAKNGTHKSPTTEISPSKQPLIPSE 732
            .|:|..:..|....|:..:..:.:.|.......:||..|.:
Zfish   617 QPQSPEQPQSPQQPQSPQQPQSPQQPQPPDQAPQQPQSPPQ 657

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GlyTNP_611836.2 SNF 57..603 CDD:249680 240/554 (43%)
slc6a1aNP_001038752.2 SLC5-6-like_sbd 2..588 CDD:294310 250/597 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 1 1.000 - - FOG0000575
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.920

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