DRSC/TRiP Functional Genomics Resources

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Protein Alignment GlyT and Slc6a19

DIOPT Version :10

Sequence 1:NP_611836.2 Gene:GlyT / 37772 FlyBaseID:FBgn0034911 Length:1188 Species:Drosophila melanogaster
Sequence 2:NP_001034811.2 Gene:Slc6a19 / 664630 RGDID:1594328 Length:634 Species:Rattus norvegicus


Alignment Length:627 Identity:222/627 - (35%)
Similarity:320/627 - (51%) Gaps:122/627 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 ESEHERGTWTGRFDFLLSLLGYSVGLGNVWRFPYLCYNNGGGAFLIPFTIMLVIAGLPLMFMELS 116
            |....|..|..:..::|:.:|:.|||||||||||||.::|||||:|||.|:||:.|:||:.:|.:
  Rat    27 EEASSRPKWDNKAQYMLTCVGFCVGLGNVWRFPYLCQSHGGGAFMIPFLILLVLEGIPLLHLEFA 91

  Fly   117 FGQYAALGPVAVYRRFCPLFRGLGTGMILVSAIVMLYYNLIIAWTIFYMFASFAPVLPWQNCEPA 181
            .||....|.|.|:....|..:|:|...:.||.:|.||||.||||.::|.|.||...|||..|   
  Rat    92 IGQRLRKGSVGVWSSIHPALKGVGIASMFVSFMVGLYYNTIIAWVMWYFFNSFQEPLPWSEC--- 153

  Fly   182 WSTKYCFSYAQADQCEATNGTYYLRTCHNATSAAENNITTLALGALKRPPAEEYF-NNFVLGLSK 245
                      ..:|    |.|.|:..|..::|.                   :|| ....|.:|.
  Rat   154 ----------PLNQ----NQTGYVEECAKSSSV-------------------DYFWYRETLNIST 185

  Fly   246 GIEETGSIKLSLAACLFLAWTIVFLCLCKGVQSSGKVVYFTALFPYVVLVILFVRGVTLPGASTG 310
            .|.::|||:..:..||..||:::::|..:|::::||.||.|:..|||||.|..:||:||.||:.|
  Rat   186 SISDSGSIQWWILLCLTCAWSVLYVCTIRGIETTGKAVYITSTLPYVVLTIFLIRGLTLKGATNG 250

  Fly   311 ILFYLTPDWKQLANAQVWGDAAVQIFFALSPAWGGLITLSSYNKFSNNCYKDSLIVAFCNIATSF 375
            |:|..||:..:|:|...|.||..|:|::.|.|:||||:.||||...|||..||:||:..|..||.
  Rat   251 IVFLFTPNITELSNPNTWLDAGAQVFYSFSLAFGGLISFSSYNSVHNNCEMDSVIVSIINGFTSV 315

  Fly   376 FAGLVIFSIIGFLAHE-----LNVDVEKVVD---------------------------------- 401
            :|..|::|||||.|.|     :|.::..:::                                  
  Rat   316 YAATVVYSIIGFRATERFDDCVNTNILTLINGFDLPEGNVTAENFEAYQHWCNATNPEAYAQLTF 380

  Fly   402 -------------QGAGLAFIVYPEVVTRLPVSPVWAVLFFVMLLTLGLDSQFALMETVTTAILD 453
                         :|.||||||:.|.:|::||||:|:||||:||..|||.|.|..||.|...:.|
  Rat   381 QTCDINTFLSEGVEGTGLAFIVFTEAITKMPVSPLWSVLFFIMLFCLGLSSMFGNMEGVVVPLQD 445

  Fly   454 RFPNLRQYKIW--------VVLSVAIFGYIGGLGFTTNSGMYWLQLMDKYAANWSVLLIAISECI 510
            .  |:...| |        :.|...:..:|    ||.|||.|||.|:|.||.:..:|:||..|..
  Rat   446 L--NITPKK-WPKELLTGLICLGTYLIAFI----FTLNSGQYWLSLLDSYAGSIPLLIIAFCEMF 503

  Fly   511 LIAWIYGSQRFLNDIQGMIGKRSWFWNFFWGIMWRYITPATLLFILFFNWV-------------- 561
            .:.::||..||..||:.|||.:.   |.||.:.||.::|..:|.|..|.:|              
  Rat   504 AVVYVYGVDRFNKDIEFMIGHKP---NIFWQVTWRVVSPLIMLVIFLFFFVIEVNKQLMYSVWDP 565

  Fly   562 EYKPAKYGHYV-YPMWADAVGWIVGLLPVLVIFLVAFQEIWR 602
            :|:.......| ||.|..||..||..:|.|.|...|..::.|
  Rat   566 DYEEFPKSQKVPYPDWVYAVVVIVAGVPCLTIPCFAIYKLIR 607

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GlyTNP_611836.2 SNF 57..597 CDD:395155 219/615 (36%)
Herpes_BLLF1 <884..1135 CDD:282904
Slc6a19NP_001034811.2 SLC5-6-like_sbd 32..612 CDD:444915 221/622 (36%)
Blue background indicates that the domain is not in the aligned region.

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