DRSC/TRiP Functional Genomics Resources

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Protein Alignment GlyT and SLC6A3

DIOPT Version :10

Sequence 1:NP_611836.2 Gene:GlyT / 37772 FlyBaseID:FBgn0034911 Length:1188 Species:Drosophila melanogaster
Sequence 2:NP_001035.1 Gene:SLC6A3 / 6531 HGNCID:11049 Length:620 Species:Homo sapiens


Alignment Length:589 Identity:238/589 - (40%)
Similarity:352/589 - (59%) Gaps:31/589 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 SGTALIQLDATGPGAGGAGESEHERGTWTGRFDFLLSLLGYSVGLGNVWRFPYLCYNNGGGAFLI 97
            :|..|.....|.|.....  ...:|.||..:.|||||::|::|.|.||||||||||.|||||||:
Human    38 NGVQLTSSTLTNPRQSPV--EAQDRETWGKKIDFLLSVIGFAVDLANVWRFPYLCYKNGGGAFLV 100

  Fly    98 PFTIMLVIAGLPLMFMELSFGQYAALGPVAVYRRFCPLFRGLGTGMILVSAIVMLYYNLIIAWTI 162
            |:.:.:||||:||.:|||:.||:...|...|: :.||:.:|:|..:||:|..|..:||:||||.:
Human   101 PYLLFMVIAGMPLFYMELALGQFNREGAAGVW-KICPILKGVGFTVILISLYVGFFYNVIIAWAL 164

  Fly   163 FYMFASFAPVLPWQNCEPAWSTKYCFSYAQADQCEATNGTYYLRTCHNATSAAENNITTLALGAL 227
            .|:|:||...|||.:|..:|::..|......|....::|.       |.|..     ||      
Human   165 HYLFSSFTTELPWIHCNNSWNSPNCSDAHPGDSSGDSSGL-------NDTFG-----TT------ 211

  Fly   228 KRPPAEEYFNNFVLGL--SKGIEETGSIKLSLAACLFLAWTIVFLCLCKGVQSSGKVVYFTALFP 290
               ||.|||...||.|  |.||::.|..:..|.|||.|...:::..|.|||::|||||:.||..|
Human   212 ---PAAEYFERGVLHLHQSHGIDDLGPPRWQLTACLVLVIVLLYFSLWKGVKTSGKVVWITATMP 273

  Fly   291 YVVLVILFVRGVTLPGASTGILFYLTPDWKQLANAQVWGDAAVQIFFALSPAWGGLITLSSYNKF 355
            ||||..|.:||||||||..||..||:.|:.:|..|.||.|||.|:.|:|...:|.||..||||||
Human   274 YVVLTALLLRGVTLPGAIDGIRAYLSVDFYRLCEASVWIDAATQVCFSLGVGFGVLIAFSSYNKF 338

  Fly   356 SNNCYKDSLIVAFCNIATSFFAGLVIFSIIGFLAHELNVDVEKVVDQGAGLAFIVYPEVVTRLPV 420
            :||||:|:::....|..|||.:|.|:||.:|::|.:.:|.:..|...|.||.||:|||.:..||:
Human   339 TNNCYRDAIVTTSINSLTSFSSGFVVFSFLGYMAQKHSVPIGDVAKDGPGLIFIIYPEAIATLPL 403

  Fly   421 SPVWAVLFFVMLLTLGLDSQFALMETVTTAILDRFPNLRQYKIWVVLSVAIFGYIGGLGFTTNSG 485
            |..|||:||:||||||:||....||:|.|.::|.|..|.:::....|.:.:..::..|...||.|
Human   404 SSAWAVVFFIMLLTLGIDSAMGGMESVITGLIDEFQLLHRHRELFTLFIVLATFLLSLFCVTNGG 468

  Fly   486 MYWLQLMDKYAANWSVLLIAISECILIAWIYGSQRFLNDIQGMIGKRSWFWNFFWGIMWRYITPA 550
            :|...|:|.:||..|:|...:.|.|.:||.||..:|.:|||.|.|:|.   :.:|.:.|:.::|.
Human   469 IYVFTLLDHFAAGTSILFGVLIEAIGVAWFYGVGQFSDDIQQMTGQRP---SLYWRLCWKLVSPC 530

  Fly   551 TLLFILFFNWVEYKPAKYGHYVYPMWADAVGWIVGLLPVLVIFLVAFQEIWRAPMSLSFRDRIKH 615
            .|||::..:.|.::|..||.|::|.||:|:||::....:.::.:.|..:....|.  |||:::.:
Human   531 FLLFVVVVSIVTFRPPHYGAYIFPDWANALGWVIATSSMAMVPIYAAYKFCSLPG--SFREKLAY 593

  Fly   616 LLQP 619
            .:.|
Human   594 AIAP 597

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GlyTNP_611836.2 SNF 57..597 CDD:395155 228/541 (42%)
Herpes_BLLF1 <884..1135 CDD:282904
SLC6A3NP_001035.1 SLC6sbd_DAT1 60..614 CDD:212083 234/565 (41%)
Interaction with TGFB1I1. /evidence=ECO:0000269|PubMed:12177201 561..590 7/30 (23%)
Blue background indicates that the domain is not in the aligned region.

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