DRSC/TRiP Functional Genomics Resources

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Protein Alignment GlyT and SLC6A1

DIOPT Version :10

Sequence 1:NP_611836.2 Gene:GlyT / 37772 FlyBaseID:FBgn0034911 Length:1188 Species:Drosophila melanogaster
Sequence 2:NP_003033.3 Gene:SLC6A1 / 6529 HGNCID:11042 Length:599 Species:Homo sapiens


Alignment Length:576 Identity:243/576 - (42%)
Similarity:353/576 - (61%) Gaps:51/576 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 ERGTWTGRFDFLLSLLGYSVGLGNVWRFPYLCYNNGGGAFLIPFTIMLVIAGLPLMFMELSFGQY 120
            :|.||.||||||:|.:||::||||||||||||..|||||||||:.:.|:.||:||..:|.|.|||
Human    43 DRDTWKGRFDFLMSCVGYAIGLGNVWRFPYLCGKNGGGAFLIPYFLTLIFAGVPLFLLECSLGQY 107

  Fly   121 AALGPVAVYRRFCPLFRGLGTGMILVSAIVMLYYNLIIAWTIFYMFASFAPVLPWQNCEPAWSTK 185
            .::|.:.|: :..|:|:|:|....::|..:.:||.:||:|.|:|::.||...|||:.|:..|:|.
Human   108 TSIGGLGVW-KLAPMFKGVGLAAAVLSFWLNIYYIVIISWAIYYLYNSFTTTLPWKQCDNPWNTD 171

  Fly   186 YCFSYAQADQCEATNGTYYLRTCHNATSAAENNITTLALGALKRPPAEEYFNNFVLGLSKGIEET 250
            .|||            .|.:....|.|||                 ..|::...:..::.|:::.
Human   172 RCFS------------NYSMVNTTNMTSA-----------------VVEFWERNMHQMTDGLDKP 207

  Fly   251 GSIKLSLAACLFLAWTIVFLCLCKGVQSSGKVVYFTALFPYVVLVILFVRGVTLPGASTGILFYL 315
            |.|:..||..|.:||.:|:.|:.|||..:||||||:|.:||::|:|||.||||||||..|||||:
Human   208 GQIRWPLAITLAIAWILVYFCIWKGVGWTGKVVYFSATYPYIMLIILFFRGVTLPGAKEGILFYI 272

  Fly   316 TPDWKQLANAQVWGDAAVQIFFALSPAWGGLITLSSYNKFSNNCYKDSLIVAFCNIATSFFAGLV 380
            ||::::|::::||.|||.||||:.....|.||.|.|||.|.||.|:||:||...|..||.|||.|
Human   273 TPNFRKLSDSEVWLDAATQIFFSYGLGLGSLIALGSYNSFHNNVYRDSIIVCCINSCTSMFAGFV 337

  Fly   381 IFSIIGFLAHELNVDVEKVVDQGAGLAFIVYPEVVTRLPVSPVWAVLFFVMLLTLGLDSQFALME 445
            ||||:||:||.....:..|...|.||||:.|||.||:||:||:||:|||.|||.||:||||..:|
Human   338 IFSIVGFMAHVTKRSIADVAASGPGLAFLAYPEAVTQLPISPLWAILFFSMLLMLGIDSQFCTVE 402

  Fly   446 TVTTAILDRFPN-LRQYKIWVVLSVAIFGYIGGLGFTTNSGMYWLQLMDKYAAN-WSVLLIAISE 508
            ...||::|.:|. ||..:...:.:|.|..|:.||...|..|:|..:|.|.|:|: .|:|.:...|
Human   403 GFITALVDEYPRLLRNRRELFIAAVCIISYLIGLSNITQGGIYVFKLFDYYSASGMSLLFLVFFE 467

  Fly   509 CILIAWIYGSQRFLNDIQGMIGKRSWFWNFFWGIMWRYITPATLLFILFFNWVEYKPAKYGHYVY 573
            |:.|:|.||..||.::||.|:|.|...|   |.:.|.:.||..:..:..|:.|:..|...|:||:
Human   468 CVSISWFYGVNRFYDNIQEMVGSRPCIW---WKLCWSFFTPIIVAGVFIFSAVQMTPLTMGNYVF 529

  Fly   574 PMWADAVGWIVGLLPVLVI-------FLVAFQEIWRAPMSLSFRDRIKHLLQPTAE 622
            |.|...|||::.|..:::|       ||.         :..|.:.||:.::||:.:
Human   530 PKWGQGVGWLMALSSMVLIPGYMAYMFLT---------LKGSLKQRIQVMVQPSED 576

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GlyTNP_611836.2 SNF 57..597 CDD:395155 238/548 (43%)
Herpes_BLLF1 <884..1135 CDD:282904
SLC6A1NP_003033.3 SLC6sbd_GAT1 2..599 CDD:212075 243/576 (42%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 577..599 243/576 (42%)
PDZ-binding 597..599
Blue background indicates that the domain is not in the aligned region.

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