DRSC/TRiP Functional Genomics Resources

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Protein Alignment GlyT and Slc6a17

DIOPT Version :10

Sequence 1:NP_611836.2 Gene:GlyT / 37772 FlyBaseID:FBgn0034911 Length:1188 Species:Drosophila melanogaster
Sequence 2:NP_001028251.1 Gene:Slc6a17 / 613226 RGDID:1587185 Length:727 Species:Rattus norvegicus


Alignment Length:807 Identity:242/807 - (29%)
Similarity:361/807 - (44%) Gaps:215/807 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 LDATGPGAGGAGESEHE-----RGTWTGRFDFLLSLLGYSVGLGNVWRFPYLCYNNGGGAFLIPF 99
            |:..|...|....:|.|     |..|..:..::|:.:|:||||||:|||||||..|||||:|:|:
  Rat    38 LNVAGETGGKQKVAEEELDAEDRPAWNSKLQYILAQIGFSVGLGNIWRFPYLCQKNGGGAYLVPY 102

  Fly   100 TIMLVIAGLPLMFMELSFGQYAALGPVAVYRRFCPLFRGLGTGMILVSAIVMLYYNLIIAWTIFY 164
            .::|:|.|:||.|:||:.||....|.:.|:...||...|:|....:|...|.||||:||.|::||
  Rat   103 LVLLIIIGIPLFFLELAVGQRIRRGSIGVWHYVCPRLGGIGFSSCIVCLFVGLYYNVIIGWSVFY 167

  Fly   165 MFASFAPVLPWQNC-----------EPAWSTKYCFSYAQADQCEATNGTYYLRTCHNATSAAENN 218
            .|.||...|||..|           ||              :||.::.|.|              
  Rat   168 FFKSFQYPLPWSECPVIRNGTVAVVEP--------------ECEKSSATTY-------------- 204

  Fly   219 ITTLALGALKRPPAEEYFNNFVLGLSKGIEETGSIKLSLAACLFLAWTIVFLCLCKGVQSSGKVV 283
                            ::....|.:|..|.|:|.:...:..||.:||:||.:.:.||:||||||:
  Rat   205 ----------------FWYREALDISNSISESGGLNWKMTVCLLVAWSIVGMAVVKGIQSSGKVM 253

  Fly   284 YFTALFPYVVLVILFVRGVTLPGASTGILFYLTPDWKQLANAQVWGDAAVQIFFALSPAWGGLIT 348
            ||::|||||||....|||:.|.||..|||...||...::.:.|||.:||.|:||||...:||:|.
  Rat   254 YFSSLFPYVVLACFLVRGLLLRGAVDGILHMFTPKLDKMLDPQVWREAATQVFFALGLGFGGVIA 318

  Fly   349 LSSYNKFSNNCYKDSLIVAFCNIATSFFAGLVIFSIIGFLAHELN-----VDVEKVVD------- 401
            .|||||..|||:.|:.:|:|.|..||..|.||:|:::||.|:.:|     .:.||::.       
  Rat   319 FSSYNKQDNNCHFDAALVSFINFFTSVLATLVVFAVLGFKANIMNEKCVVENAEKILGYLNSNVL 383

  Fly   402 ----------------------------------------------------QGAGLAFIVYPEV 414
                                                                ||.|||||.:.|.
  Rat   384 SRDLIPPHVNFSHLTTKDYSEMYNVIMTVKEKQFSALGLDPCLLEDELDKSVQGTGLAFIAFTEA 448

  Fly   415 VTRLPVSPVWAVLFFVMLLTLGLDSQFALMETVTTAILDRFPNLRQYKIWVVLSVAIFGYIGGLG 479
            :|..|.||.|:|:||:||:.|||.|....|..:||.|:|.|   :..|....:...:|.:..||.
  Rat   449 MTHFPASPFWSVMFFLMLINLGLGSMIGTMAGITTPIIDTF---KVPKEMFTVGCCVFAFFVGLL 510

  Fly   480 FTTNSGMYWLQLMDKYAANWSVLLIAISECILIAWIYGSQRFLNDIQGMIGKRSWFWNFFWGIMW 544
            |...||.|::.:.|.|:|...:.:|.|.|.|.:|||||:::|:.::..|:|.|.:.:.|:   ||
  Rat   511 FVQRSGNYFVTMFDDYSATLPLTVIVILENIAVAWIYGTKKFMQELTEMLGFRPYRFYFY---MW 572

  Fly   545 RYITPATLLFIL-------------FFNWVEYKPAKYGHYVY-PMWADAVGWIVGLLPVLVIFLV 595
            ::::|..:..:.             :..|::.:.|:  .|:| |.||.|          |:|.|:
  Rat   573 KFVSPLCMAVLTTASIIQLGVSPPGYSAWIKEEAAE--RYLYFPNWAMA----------LLITLI 625

  Fly   596 AFQEIWRAPMSLSFRDRIKHLLQPTAEWGPAGRPCVNLHAERYQSQNYDGVTNTKILIEEEASPK 660
            |...:   |:.:.|..|..|||.                         ||.....:..::....|
  Rat   626 AVATL---PIPVVFILRHFHLLS-------------------------DGSNTLSVSYKKGRMMK 662

  Fly   661 QAANKKDRQLTLDVDVDVECLPLATVGKRPG-APKSMGKQGSSGNLQTNAKNGTHKSPTTEISP- 723
            ..:|.::...|..:           :.|.|. ||..|               .||:|   .:.| 
  Rat   663 DISNLEENDETRFI-----------LSKVPSEAPSPM---------------PTHRS---YLGPG 698

  Fly   724 SKQPLIPSEKDNKSANIKVLAAGTQSS 750
            |..||..|...|.......|.|.|..|
  Rat   699 STSPLESSSHPNGRYGSGYLLASTPES 725

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GlyTNP_611836.2 SNF 57..597 CDD:395155 207/628 (33%)
Herpes_BLLF1 <884..1135 CDD:282904
Slc6a17NP_001028251.1 SLC6sbd_NTT4 60..648 CDD:271403 215/677 (32%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 680..727 17/64 (27%)
Blue background indicates that the domain is not in the aligned region.

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