DRSC/TRiP Functional Genomics Resources

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Protein Alignment GlyT and si:ch211-132b12.2

DIOPT Version :9

Sequence 1:NP_611836.2 Gene:GlyT / 37772 FlyBaseID:FBgn0034911 Length:1188 Species:Drosophila melanogaster
Sequence 2:NP_001038688.1 Gene:si:ch211-132b12.2 / 571877 ZFINID:ZDB-GENE-050420-178 Length:582 Species:Danio rerio


Alignment Length:578 Identity:222/578 - (38%)
Similarity:338/578 - (58%) Gaps:42/578 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 GESEHERGTWTGRFDFLLSLLGYSVGLGNVWRFPYLCYNNGGGAFLIPFTIMLVIAGLPLMFMEL 115
            |:.| |||.|..:.:|:|::.|..:|||||||||||||.|||||||:|:.:.:|..|:||..:|.
Zfish     6 GQIE-ERGNWGSKTEFILAVAGIVIGLGNVWRFPYLCYKNGGGAFLVPYLVFVVTCGVPLFLLET 69

  Fly   116 SFGQYAALGPVAVYRRFCPLFRGLGTGMILVSAIVMLYYNLIIAWTIFYMFASFAPVLPWQNCEP 180
            :.|||...|.:..:.|.|||..|:|....|:.....:||.:|:||.:||:..||:..|||.:|:.
Zfish    70 AMGQYTQEGGITCWHRLCPLAEGIGYAGQLIVLYSCMYYIIILAWALFYLAFSFSSQLPWASCDN 134

  Fly   181 AWSTKYCFSYAQADQCEATNGTYYLRTCHNATSAAENNI---TTLALGALKRPPAEEYFNNFVLG 242
            .|:|..|                        .:.|||.:   |.:.|.:..  ...|::.:.||.
Zfish   135 IWNTDAC------------------------VNLAENKLNLSTPMLLNSTS--SVTEFWQHRVLA 173

  Fly   243 LSKGIEETGSIKLSLAACLFLAWTIVFLCLCKGVQSSGKVVYFTALFPYVVLVILFVRGVTLPGA 307
            ||.|||:.|.|...:..||.:.|.|.:.|:.|||:|:||||||||.||||:|::|.:||:|||||
Zfish   174 LSGGIEKVGKINWEILLCLIVMWIICYFCVWKGVKSTGKVVYFTATFPYVMLLVLLIRGLTLPGA 238

  Fly   308 STGILFYLTPDWKQLANAQVWGDAAVQIFFALSPAWGGLITLSSYNKFSNNCYKDSLIVAFCNIA 372
            ..|::|||.|:..:||:.|||.:|..||||:.:.....|..|.||||::.|||:.||.:...|.:
Zfish   239 LQGVVFYLYPEPARLADPQVWMEAGAQIFFSYALGTASLTVLGSYNKYNYNCYRSSLWLCLLNSS 303

  Fly   373 TSFFAGLVIFSIIGFLAHELNVDVEKVVDQGAGLAFIVYPEVVTRLPVSPVWAVLFFVMLLTLGL 437
            ||..||..:||::||:|.:..:.:|:|.:.|.|||||.||:.|..:|...:||..||:|::.|||
Zfish   304 TSVIAGFAVFSVLGFMAQKQGLPIEEVAESGPGLAFIAYPQAVAMMPFPQLWAACFFIMIILLGL 368

  Fly   438 DSQFALMETVTTAILDRFPN-LR---QYKIWVVLSVAIFGYIGGLGFTTNSGMYWLQLMDKYAAN 498
            |:||..||...|:::|.||. ||   :.:|:::| ..:|.:.|.|...|..|||..||.|.||.:
Zfish   369 DTQFVAMEVFMTSVIDLFPTVLRKAGRREIFLLL-FCLFCFFGQLVMVTEGGMYVFQLFDYYACS 432

  Fly   499 WSVLL-IAISECILIAWIYGSQRFLNDIQGMIGKRSWFWNFFWGIMWRYITPATLLFILFFNWVE 562
            .:.|| :.:.|.:.:.|::|:::....|:.|...|.   |:::.:.|:|:||...|.....:.|:
Zfish   433 GACLLFLCVFESLAMGWVFGAEKMFGIIEDMTNSRP---NYWFMLCWKYLTPIVSLASFVCSLVK 494

  Fly   563 YKPAKYGH-YVYPMWADAVGWIVGLLPVLVIFLVAFQEIWRAPMSLSFRDRIKHLLQP 619
            |||..:.. ||||.||..:||::.|..:|::...|...::....|:  :.|..||..|
Zfish   495 YKPLTFNRWYVYPDWAYVLGWLLALSSILLVPGWALGRMFAGKGSI--KQRWSHLCSP 550

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GlyTNP_611836.2 SNF 57..603 CDD:249680 214/554 (39%)
si:ch211-132b12.2NP_001038688.1 SLC6sbd-TauT-like 11..550 CDD:271387 218/570 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.820

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