DRSC/TRiP Functional Genomics Resources

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Protein Alignment GlyT and slc6a6b

DIOPT Version :9

Sequence 1:NP_611836.2 Gene:GlyT / 37772 FlyBaseID:FBgn0034911 Length:1188 Species:Drosophila melanogaster
Sequence 2:NP_001032750.1 Gene:slc6a6b / 569098 ZFINID:ZDB-GENE-030131-3077 Length:625 Species:Danio rerio


Alignment Length:606 Identity:256/606 - (42%)
Similarity:360/606 - (59%) Gaps:41/606 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 PGAGGAGESE--H-ERGTWTGRFDFLLSLLGYSVGLGNVWRFPYLCYNNGGGAFLIPFTIMLVIA 106
            ||.....|:|  | :|..|..:.|||||:.|..||||||||||||||.|||||||||:.|.|...
Zfish    26 PGTRPEDEAEGKHPQREKWASKLDFLLSVAGGFVGLGNVWRFPYLCYKNGGGAFLIPYFIFLFGG 90

  Fly   107 GLPLMFMELSFGQYAALGPVAVYRRFCPLFRGLGTGMILVSAIVMLYYNLIIAWTIFYMFASFAP 171
            |||:.|:|::.||:.:.|.:..:.:.||:|.|:|...|::.:::.:||.:|:||.::|:|..|.|
Zfish    91 GLPVFFLEVALGQFTSEGGITCWEKLCPIFTGIGYASIVIVSLLNIYYIVILAWGLYYLFQCFQP 155

  Fly   172 VLPWQNCEPAWSTKYCFSYAQADQCEATNGTYYLRTCHNATSAAENNITTLALGALKRPPAEEYF 236
            .|||.:|...|:|:.|        .|.|     ||  .|.|..|..|.|...      .|..|::
Zfish   156 ELPWASCNNKWNTENC--------VEDT-----LR--RNKTLWAAANATNFT------SPVTEFW 199

  Fly   237 NNFVLGLSKGIEETGSIKLSLAACLFLAWTIVFLCLCKGVQSSGKVVYFTALFPYVVLVILFVRG 301
            ...||.:|.||||.|.:|..||.||...|.|.|.|:.|||:|:|||||.||.||:|:|::|.|||
Zfish   200 ERNVLSISDGIEEVGHVKWDLALCLLAMWVICFFCVWKGVKSTGKVVYVTATFPFVMLIVLLVRG 264

  Fly   302 VTLPGASTGILFYLTPDWKQLANAQVWGDAAVQIFFALSPAWGGLITLSSYNKFSNNCYKDSLIV 366
            ||||||:.||.|||.|:..:|.:.:||.||..||||:.:...|.:.:|.||||:..|||:|.|::
Zfish   265 VTLPGAAEGIKFYLYPNVTRLGDPEVWIDAGTQIFFSYAICLGAMTSLGSYNKYKYNCYRDCLLL 329

  Fly   367 AFCNIATSFFAGLVIFSIIGFLAHELNVDVEKVVDQGAGLAFIVYPEVVTRLPVSPVWAVLFFVM 431
            ...|.||||.:|..|||::||:|.|..||:..|.:.|.|||||.||:.||.:|:...||:|||:|
Zfish   330 GGLNSATSFVSGFAIFSVLGFMAQEQGVDIADVAESGPGLAFIAYPKAVTMMPLPTFWAILFFIM 394

  Fly   432 LLTLGLDSQFALMETVTTAILDRFPN-LRQ-YKIWVVLSVAIF-GYIGGLGFTTNSGMYWLQLMD 493
            ||.|||||||..:|...|:::|.:|: ||: |:..:.:::..| .|:.||...|..|||..||.|
Zfish   395 LLLLGLDSQFVEVEGQITSLVDLYPSFLRKGYRREIFIAIVCFVSYLLGLTMVTEGGMYVFQLFD 459

  Fly   494 KYAANWSVLL-IAISECILIAWIYGSQRFLNDIQGMIGKRSWFWNFFWGIMWRYITPATLLFILF 557
            .|||:...|| :|..|||.:||:||:..|.:.|:.|||.|...| ..|.  |..:||...:....
Zfish   460 YYAASGVCLLWVAFFECIAVAWVYGADNFYDAIEEMIGYRPNPW-MKWS--WTVVTPFLCVGCFI 521

  Fly   558 FNWVEYKPAKYGH-YVYPMWADAVGWIVGLLPVLVIFLVAFQEIWRAPMSLSFRDRIKHLLQPTA 621
            |:.|:|.|.:|.. |.||.|:..|||.:.|..::.|.:|...:|.::...|.  :|||.:..| .
Zfish   522 FSLVKYAPLRYNKIYEYPDWSIGVGWTLALASMICIPMVVVIKIIQSDGPLI--ERIKAVAAP-V 583

  Fly   622 EWGPAGRPCVNLHAERYQSQN 642
            ..|.:..|      :.||.::
Zfish   584 RGGASSCP------QEYQPKS 598

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GlyTNP_611836.2 SNF 57..603 CDD:249680 242/550 (44%)
slc6a6bNP_001032750.1 SLC6sbd_TauT 41..582 CDD:271398 246/566 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.920

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