DRSC/TRiP Functional Genomics Resources

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Protein Alignment GlyT and slc6a16b

DIOPT Version :10

Sequence 1:NP_611836.2 Gene:GlyT / 37772 FlyBaseID:FBgn0034911 Length:1188 Species:Drosophila melanogaster
Sequence 2:NP_001103944.1 Gene:slc6a16b / 567809 ZFINID:ZDB-GENE-070424-95 Length:676 Species:Danio rerio


Alignment Length:752 Identity:227/752 - (30%)
Similarity:339/752 - (45%) Gaps:190/752 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 EHERGTWTGRFDFLLSLLGYSVGLGNVWRFPYLCYNNGGGAFLIPFTIMLVIAGLPLMFMELSFG 118
            |..|..|..:.::.|:.:|:||||||||||||||:.||||||::.:.:::.:.|:||.|:||:.|
Zfish    30 ETARDGWDSKVEYFLAQVGFSVGLGNVWRFPYLCHQNGGGAFILLYVVLMALVGVPLFFLELAAG 94

  Fly   119 QYAALGPVAVYRRFCPLFRGLGTGMILVSAIVMLYYNLIIAWTIFYMFASFAPVLPWQNCEPAWS 183
            |....|.:.|:|...|...|:|....:|...|.||||:||.|:|||:..||...|||:.|     
Zfish    95 QSIRQGSIGVWRHISPKLVGIGYSSCVVCFFVALYYNVIIGWSIFYLGNSFQYPLPWEKC----- 154

  Fly   184 TKYCFSYAQADQCEATNGTYYLRTCHNATSAAENNITTLALGALKRPPAEEYFNNFVLGLSKGIE 248
                          .|.|...::.|     ||.:             |...::....|.::..|:
Zfish   155 --------------PTEGNSTVKEC-----AASS-------------PTAYFWYRKALDITDSID 187

  Fly   249 ETGSIKLSLAACLFLAWTIVFLCLCKGVQSSGKVVYFTALFPYVVLVILFVRGVTLPGASTGILF 313
            |||.....|..||..||.||.|.:.||::|||||:||:::||||||:...:|||||.|||.||.|
Zfish   188 ETGEFNFILTGCLLAAWVIVCLAMYKGIKSSGKVMYFSSVFPYVVLLCFLIRGVTLDGASEGIKF 252

  Fly   314 YLTPDWKQLANAQVWGDAAVQIFFALSPAWGGLITLSSYNKFSNNCYKDSLIVAFCNIATSFFAG 378
            ...|..:..|:.|||..||.|:||||...:|.:|..||||..:|||::|:..|:..|..||..|.
Zfish   253 MFYPRLEIWADVQVWRQAATQVFFALGLGFGSVIAYSSYNPRNNNCHRDAFTVSGVNFMTSVLAT 317

  Fly   379 LVIFSIIGFLAHELNV---------------------------DVEKV----------------- 399
            ||:|:::||.|..:..                           |||.:                 
Zfish   318 LVVFAVLGFRAKTIAAECVKRNLKALLKVTSSAPLPVLSINASDVESISLDEYANWYSTQGMELS 382

  Fly   400 --------------VDQG---AGLAFIVYPEVVTRLPVSPVWAVLFFVMLLTLGLDSQFALMETV 447
                          :.||   .|||||.:.|.:|..|.||.|:.|||:|||.|||.:.|..|..:
Zfish   383 ISDYNITACSLEDELRQGVEETGLAFIAFTEAMTLFPGSPFWSALFFLMLLNLGLSTMFGTMAGI 447

  Fly   448 TTAILDRFPNLRQYKIWVVLSVAIFGYIGGLGFTTNSGMYWLQLMDKYAANWSVLLIAISECILI 512
            .|.:.|.|..||.:|:...:.....|::.||.||...|.|::.:.|.|:|...::::.|.:.|.:
Zfish   448 LTPLTDTFKTLRNHKLIFTICSCTVGFVIGLVFTQRCGNYFVTMFDDYSATLPLIIVVIFQTISV 512

  Fly   513 AWIYGSQRFLNDIQGMIGKRSWFWNFFWGIMWRYITPATLLFIL-------------FFNWVEYK 564
            :|:||:.|||.|::.|:.:..   ...:..:|:::.|..:|.:|             :..|...|
Zfish   513 SWVYGADRFLEDLKQMLNRPV---PVIYKYLWKFVCPIAMLGLLGASLLKMILKRPEYSAWNREK 574

  Fly   565 PAKYGHYVYPMWADAVGWIVGLLPVLVIFLVAFQEIWRAPMSLSFRDRIKHLLQPTAEWGPAG-- 627
            .:| ....||.||         |.||:|.::    |...|:.:.:   |..||.......||.  
Zfish   575 ASK-EDLPYPDWA---------LAVLIILII----IASLPVPIGY---IHSLLLERLGQSPADTE 622

  Fly   628 ---RPCVNLHAERYQSQNYDGVTNTKILIEEEASPKQAANKKDRQLTLDVDVDVECLPLATVGKR 689
               .||.                                       |.|.|:    .||:|:   
Zfish   623 ARYTPCA---------------------------------------TTDTDL----TPLSTL--- 641

  Fly   690 PGAPKSMGKQGSS-----GNLQTNAKNGTHKSPTTEI 721
               |.|.....||     ||..::.:||..:|..:.:
Zfish   642 ---PPSRDDLNSSHPLLEGNHNSHLQNGHIESVESSV 675

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GlyTNP_611836.2 SNF 57..597 CDD:395155 202/613 (33%)
Herpes_BLLF1 <884..1135 CDD:282904
slc6a16bNP_001103944.1 SLC6sbd-B0AT-like 33..607 CDD:271364 204/630 (32%)
Blue background indicates that the domain is not in the aligned region.

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