DRSC/TRiP Functional Genomics Resources

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Protein Alignment GlyT and slc6a8

DIOPT Version :9

Sequence 1:NP_611836.2 Gene:GlyT / 37772 FlyBaseID:FBgn0034911 Length:1188 Species:Drosophila melanogaster
Sequence 2:NP_001314797.1 Gene:slc6a8 / 567544 ZFINID:ZDB-GENE-071024-2 Length:652 Species:Danio rerio


Alignment Length:679 Identity:278/679 - (40%)
Similarity:384/679 - (56%) Gaps:77/679 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 GQSSKSGSA--GVGGVGGGGGVVCPSTAISGCASGTALIQLDATGPGAGGAGESEHERGTWTGRF 64
            |....:|:|  .|.|...||    |.:|.:|..|.....:            |...||.|||.:.
Zfish    23 GHLIPNGNAHPSVNGTLNGG----PMSAATGAISAVEKKR------------EGYPERETWTRQM 71

  Fly    65 DFLLSLLGYSVGLGNVWRFPYLCYNNGGGAFLIPFTIMLVIAGLPLMFMELSFGQYAALGPVAVY 129
            ||::|.:|::||||||||||||||.||||.||||:.:.:.:.|:|:.|:|::.||:...|.:.|:
Zfish    72 DFIMSCVGFAVGLGNVWRFPYLCYKNGGGVFLIPYVLFIFLGGIPIFFLEIALGQFMKAGSINVW 136

  Fly   130 RRFCPLFRGLGTGMILVSAIVMLYYNLIIAWTIFYMFASFAPVLPWQNCEPAWSTKYCFSYAQAD 194
             ...|||:|||...:::......||.:::||..:|...||...|||..|:..|:|:.|....:..
Zfish   137 -NIAPLFKGLGYASMVIVFFCNTYYIMVLAWGFYYFIKSFNATLPWSTCDNPWNTENCIEIFRQG 200

  Fly   195 QCEATNGTYYLRTCHNATSAAENNITTLALGALKRPPAEEYFNNFVLGLSKGIEETGSIKLSLAA 259
            .|:  |||....|..|.|      ...||.|   |.|..|::.|.||.:|.|::|.|::...|..
Zfish   201 DCK--NGTIGNSTFGNLT------CEELANG---RSPIIEFWENKVLNISDGLDEPGAVNWELML 254

  Fly   260 CLFLAWTIVFLCLCKGVQSSGKVVYFTALFPYVVLVILFVRGVTLPGASTGILFYLTPDWKQLAN 324
            ||...|.:|:.|:.|||:|:||:|||||.||||||:||.|||||||||..|||:|:.|||.:|..
Zfish   255 CLLAVWVMVYFCVWKGVKSTGKIVYFTATFPYVVLIILLVRGVTLPGAYDGILYYVKPDWSKLGE 319

  Fly   325 AQVWGDAAVQIFFALSPAWGGLITLSSYNKFSNNCYKDSLIVAFCNIATSFFAGLVIFSIIGFLA 389
            ||||.||..||||:.:...|.|..|.|||:|:|:||||:.::|..|..||||||.|:|||:||:|
Zfish   320 AQVWIDAGTQIFFSYAIGLGALTALGSYNRFNNDCYKDAFVLALINSGTSFFAGFVVFSILGFMA 384

  Fly   390 HELNVDVEKVVDQGAGLAFIVYPEVVTRLPVSPVWAVLFFVMLLTLGLDSQFALMETVTTAILDR 454
            .|..||:.||.:.|.|||||.||:.|:.:||:||||.|||:|||.|||||||..:|...|.|||.
Zfish   385 SEQGVDISKVAESGPGLAFIAYPKAVSMMPVAPVWAALFFIMLLLLGLDSQFVGVEGFVTGILDL 449

  Fly   455 FPN---LRQYKIWVVLSVAIFGYIGGLGFTTNSGMYWLQLMDKYAANWSVLL-IAISECILIAWI 515
            ||.   :|..:...|....:..:|..|...|..|||..||.|.|:|:...|| .|..||:::||:
Zfish   450 FPGKYYMRYQREIAVAICCLLCFIIDLSMVTQGGMYVFQLFDYYSASGMTLLWQAFWECVVVAWV 514

  Fly   516 YGSQRFLNDIQGMIGKRSWFWNFFWGIMWRYITPATLLFILFFNWVEYKPAKYGH-YVYPMWADA 579
            ||:.||::||..|||.|.:.| ..|  .|..|||...:.|..|:.:.|||..|.: ||||.|.:.
Zfish   515 YGADRFMDDIARMIGYRPFPW-MKW--CWSIITPCVCMGIFLFHLLNYKPLTYNNVYVYPWWGEV 576

  Fly   580 VGWIVGLLPVLVIFLVAFQEIWRAPMSL---------SFRDRIKHLLQPTAEWGPAGRPCVNLHA 635
            :||.:.|..:|.|           |:||         :|::|.::|.:|.  ||        .|.
Zfish   577 IGWCLALSSMLCI-----------PVSLVYKLSGAKGTFKERWENLTKPV--WG--------AHH 620

  Fly   636 ERYQSQNYD---------GVTNTKILIEE 655
            ..|.:.:.|         |:...|::|.|
Zfish   621 LEYMAPDTDIKSLASLSPGMEENKVIIFE 649

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GlyTNP_611836.2 SNF 57..603 CDD:249680 249/550 (45%)
slc6a8NP_001314797.1 SLC6sbd_CT1 64..652 CDD:271397 265/622 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 1 1.000 - - FOG0000575
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.820

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