DRSC/TRiP Functional Genomics Resources

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Protein Alignment GlyT and slc6a8

DIOPT Version :10

Sequence 1:NP_611836.2 Gene:GlyT / 37772 FlyBaseID:FBgn0034911 Length:1188 Species:Drosophila melanogaster
Sequence 2:NP_001314797.1 Gene:slc6a8 / 567544 ZFINID:ZDB-GENE-071024-2 Length:652 Species:Danio rerio


Alignment Length:679 Identity:278/679 - (40%)
Similarity:384/679 - (56%) Gaps:77/679 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 GQSSKSGSA--GVGGVGGGGGVVCPSTAISGCASGTALIQLDATGPGAGGAGESEHERGTWTGRF 64
            |....:|:|  .|.|...||    |.:|.:|..|.....:            |...||.|||.:.
Zfish    23 GHLIPNGNAHPSVNGTLNGG----PMSAATGAISAVEKKR------------EGYPERETWTRQM 71

  Fly    65 DFLLSLLGYSVGLGNVWRFPYLCYNNGGGAFLIPFTIMLVIAGLPLMFMELSFGQYAALGPVAVY 129
            ||::|.:|::||||||||||||||.||||.||||:.:.:.:.|:|:.|:|::.||:...|.:.|:
Zfish    72 DFIMSCVGFAVGLGNVWRFPYLCYKNGGGVFLIPYVLFIFLGGIPIFFLEIALGQFMKAGSINVW 136

  Fly   130 RRFCPLFRGLGTGMILVSAIVMLYYNLIIAWTIFYMFASFAPVLPWQNCEPAWSTKYCFSYAQAD 194
             ...|||:|||...:::......||.:::||..:|...||...|||..|:..|:|:.|....:..
Zfish   137 -NIAPLFKGLGYASMVIVFFCNTYYIMVLAWGFYYFIKSFNATLPWSTCDNPWNTENCIEIFRQG 200

  Fly   195 QCEATNGTYYLRTCHNATSAAENNITTLALGALKRPPAEEYFNNFVLGLSKGIEETGSIKLSLAA 259
            .|:  |||....|..|.|      ...||.|   |.|..|::.|.||.:|.|::|.|::...|..
Zfish   201 DCK--NGTIGNSTFGNLT------CEELANG---RSPIIEFWENKVLNISDGLDEPGAVNWELML 254

  Fly   260 CLFLAWTIVFLCLCKGVQSSGKVVYFTALFPYVVLVILFVRGVTLPGASTGILFYLTPDWKQLAN 324
            ||...|.:|:.|:.|||:|:||:|||||.||||||:||.|||||||||..|||:|:.|||.:|..
Zfish   255 CLLAVWVMVYFCVWKGVKSTGKIVYFTATFPYVVLIILLVRGVTLPGAYDGILYYVKPDWSKLGE 319

  Fly   325 AQVWGDAAVQIFFALSPAWGGLITLSSYNKFSNNCYKDSLIVAFCNIATSFFAGLVIFSIIGFLA 389
            ||||.||..||||:.:...|.|..|.|||:|:|:||||:.::|..|..||||||.|:|||:||:|
Zfish   320 AQVWIDAGTQIFFSYAIGLGALTALGSYNRFNNDCYKDAFVLALINSGTSFFAGFVVFSILGFMA 384

  Fly   390 HELNVDVEKVVDQGAGLAFIVYPEVVTRLPVSPVWAVLFFVMLLTLGLDSQFALMETVTTAILDR 454
            .|..||:.||.:.|.|||||.||:.|:.:||:||||.|||:|||.|||||||..:|...|.|||.
Zfish   385 SEQGVDISKVAESGPGLAFIAYPKAVSMMPVAPVWAALFFIMLLLLGLDSQFVGVEGFVTGILDL 449

  Fly   455 FPN---LRQYKIWVVLSVAIFGYIGGLGFTTNSGMYWLQLMDKYAANWSVLL-IAISECILIAWI 515
            ||.   :|..:...|....:..:|..|...|..|||..||.|.|:|:...|| .|..||:::||:
Zfish   450 FPGKYYMRYQREIAVAICCLLCFIIDLSMVTQGGMYVFQLFDYYSASGMTLLWQAFWECVVVAWV 514

  Fly   516 YGSQRFLNDIQGMIGKRSWFWNFFWGIMWRYITPATLLFILFFNWVEYKPAKYGH-YVYPMWADA 579
            ||:.||::||..|||.|.:.| ..|  .|..|||...:.|..|:.:.|||..|.: ||||.|.:.
Zfish   515 YGADRFMDDIARMIGYRPFPW-MKW--CWSIITPCVCMGIFLFHLLNYKPLTYNNVYVYPWWGEV 576

  Fly   580 VGWIVGLLPVLVIFLVAFQEIWRAPMSL---------SFRDRIKHLLQPTAEWGPAGRPCVNLHA 635
            :||.:.|..:|.|           |:||         :|::|.::|.:|.  ||        .|.
Zfish   577 IGWCLALSSMLCI-----------PVSLVYKLSGAKGTFKERWENLTKPV--WG--------AHH 620

  Fly   636 ERYQSQNYD---------GVTNTKILIEE 655
            ..|.:.:.|         |:...|::|.|
Zfish   621 LEYMAPDTDIKSLASLSPGMEENKVIIFE 649

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GlyTNP_611836.2 SNF 57..597 CDD:395155 249/544 (46%)
Herpes_BLLF1 <884..1135 CDD:282904
slc6a8NP_001314797.1 SLC6sbd_CT1 64..652 CDD:271397 265/622 (43%)
Blue background indicates that the domain is not in the aligned region.

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