DRSC/TRiP Functional Genomics Resources

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Protein Alignment GlyT and slc6a7

DIOPT Version :9

Sequence 1:NP_611836.2 Gene:GlyT / 37772 FlyBaseID:FBgn0034911 Length:1188 Species:Drosophila melanogaster
Sequence 2:XP_005161359.1 Gene:slc6a7 / 562050 ZFINID:ZDB-GENE-070112-1492 Length:652 Species:Danio rerio


Alignment Length:664 Identity:271/664 - (40%)
Similarity:386/664 - (58%) Gaps:75/664 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 GGGGVVCPSTAISGCASG--TALIQLDATGPGAGGAGESEHERGTWTGRFDFLLSLLGYSVGLGN 79
            |.|.:..|||......:|  ::.:...:..|.:..:..::..|..|.|:::||||.:||.|||||
Zfish    29 GNGVITTPSTENPAHQNGAVSSPVASQSQPPSSAASPPAQPPRDQWGGKYEFLLSCIGYCVGLGN 93

  Fly    80 VWRFPYLCYNNGGGAFLIPFTIMLVIAGLPLMFMELSFGQYAALGPVAVYRRFCPLFRGLGTGMI 144
            |||||||||.||||.||||:.|||...|:||..||||.|||.|.||:.|: :.|||.:|:|.||:
Zfish    94 VWRFPYLCYRNGGGVFLIPYFIMLFFTGMPLFLMELSLGQYGAAGPITVW-KCCPLLKGIGIGML 157

  Fly   145 LVSAIVMLYYNLIIAWTIFYMFASFAPVLPWQNCEPAWSTKYCFSYAQADQCEATNGTYYLRTCH 209
            .||.:|.||||:|||||.:|:.:||...|||                   .|:|...   :..|.
Zfish   158 CVSTLVCLYYNVIIAWTFYYLGSSFQSPLPW-------------------SCDALQN---IALCA 200

  Fly   210 NATSAAENNITTLALGALKRPPAEEYFNNFVLGL--SKGIEETGSIKLSLAACLFLAWTIVFLCL 272
            |.|::.::             |:|.::|..|||:  |.|:.:.|.::..||.||..||.|:|||:
Zfish   201 NKTNSTQS-------------PSEVFWNEKVLGVVHSTGLSDPGPVRWPLALCLLAAWIIIFLCM 252

  Fly   273 CKGVQSSGKVVYFTALFPYVVLVILFVRGVTLPGASTGILFYLTPDWKQLANAQVWGDAAVQIFF 337
            .||:.|||||||.||.|||.||::|.:||.||.|:..|:.|||||.|.|||:||||.|||.|||:
Zfish   253 LKGIHSSGKVVYVTATFPYFVLLVLIIRGATLEGSLDGVAFYLTPKWDQLADAQVWNDAASQIFY 317

  Fly   338 ALSPAWGGLITLSSYNKFSNNCYKDSLIVAFCNIATSFFAGLVIFSIIGFLAHELNVDVEKVVDQ 402
            :|....|||::::|||||.||..:|::|:...|.:||||||..||||:|.:|.:..|.|:||.|.
Zfish   318 SLGIGVGGLLSMASYNKFDNNVIRDTIIITIGNCSTSFFAGFAIFSILGHMAFKKGVPVDKVADS 382

  Fly   403 GAGLAFIVYPEVVTRLPVSPVWAVLFFVMLLTLGLDSQFALMETVTTAILDRFPNLR---QYKIW 464
            |.||||:.|||.:..||.|..|::|||:||..||:|:.|..||.:.||:||.||.||   ::|. 
Zfish   383 GPGLAFVAYPEALALLPGSVFWSILFFLMLFMLGVDTLFGNMEGICTAVLDEFPQLRSNLKHKT- 446

  Fly   465 VVLSVAIFG-YIGGLGFTTNSGMYWLQLMDKYAANWSVLLIAISECILIAWIYGSQRFLNDIQGM 528
            :.|:|..|. |:.||...|:.|:||..|:|.::.::.:::|.:..||.|::.||..:|..||..|
Zfish   447 LFLAVLCFSFYLMGLLLITDGGIYWFTLIDSFSTSFGLIIITLFMCIGISFFYGVNQFCQDIVDM 511

  Fly   529 IGK-RSWFWN--FFWGIMWRYITPATLLFILFFNWVE-YKPA-KYGHYVYPMWADAVGWIVGLLP 588
            |.: ..|...  .::...|...||..|.|||.:.::| |:.: :||.||||:|..|:|..:|.|.
Zfish   512 ICRCPPWCTKMLLYFKACWVVFTPFLLTFILTYIFIEMYRTSLRYGSYVYPIWGKALGVCMGALC 576

  Fly   589 VLVIFLVAFQEIWRAPMSLSFRDRIKHLLQPTAEW--------------------GPAGRPCVNL 633
            .|.|.:.|...|  :..|.:.:||.|..::|...|                    ||.   .|||
Zfish   577 CLQILIWAIVAI--SKESGTLKDRFKKSIRPLNSWRVNNINSSSQEQHVEPHTIEGPF---TVNL 636

  Fly   634 HAERYQSQNYDGVT 647
            ....|...|::|::
Zfish   637 TEADYTGMNWEGIS 650

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GlyTNP_611836.2 SNF 57..603 CDD:249680 250/556 (45%)
slc6a7XP_005161359.1 SLC5-6-like_sbd 71..610 CDD:294310 255/577 (44%)
PotE <235..564 CDD:223605 154/329 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100873
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.720

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