DRSC/TRiP Functional Genomics Resources

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Protein Alignment GlyT and slc6a19a.1

DIOPT Version :10

Sequence 1:NP_611836.2 Gene:GlyT / 37772 FlyBaseID:FBgn0034911 Length:1188 Species:Drosophila melanogaster
Sequence 2:NP_001091648.1 Gene:slc6a19a.1 / 553256 ZFINID:ZDB-GENE-070620-2 Length:629 Species:Danio rerio


Alignment Length:621 Identity:210/621 - (33%)
Similarity:316/621 - (50%) Gaps:117/621 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 ERGTWTGRFDFLLSLLGYSVGLGNVWRFPYLCYNNGGGAFLIPFTIMLVIAGLPLMFMELSFGQY 120
            ||..|..:..::|:.:|:.|||||||||||||.::|||||:|||.|:||:.|:||:.:|.:.||.
Zfish    30 ERPKWDNKAQYMLTCVGFCVGLGNVWRFPYLCQSHGGGAFMIPFLILLVLEGVPLLHLEFAIGQR 94

  Fly   121 AALGPVAVYRRFCPLFRGLGTGMILVSAIVMLYYNLIIAWTIFYMFASFAPVLPWQNCEPAWSTK 185
            ...|.|.|:|...|...|:|...:|.|.||.:|||.|:||.::|:|.|....|||..| |.    
Zfish    95 LRSGSVGVWRSISPYLTGVGIASMLASFIVGMYYNTIMAWVMWYLFNSLQEPLPWSQC-PV---- 154

  Fly   186 YCFSYAQADQCEATNGTYYLRTCHNATSAAENNITTLALGALKRPPAEEYFNNFVLGLSKGIEET 250
                        ..|.|..:..|..::                  |.:.::....|..|..||::
Zfish   155 ------------NLNRTGLVSECERSS------------------PVDYFWYRETLNTSTAIEDS 189

  Fly   251 GSIKLSLAACLFLAWTIVFLCLCKGVQSSGKVVYFTALFPYVVLVILFVRGVTLPGASTGILFYL 315
            |:::..|..||..|||.:::|..:|::::||.||.|:..|||||.|..:|.:||.|:..||.|..
Zfish   190 GALQWWLVLCLLCAWTFLYICCIRGIETTGKAVYITSTLPYVVLTIFLIRALTLKGSVNGIKFLF 254

  Fly   316 TPDWKQLANAQVWGDAAVQIFFALSPAWGGLITLSSYNKFSNNCYKDSLIVAFCNIATSFFAGLV 380
            |||..:|.|...|.||..|:.|:.|.|:||||:.||||...|||.:|::.::..|..||.::..|
Zfish   255 TPDVNELMNPSTWLDAGAQVLFSFSLAFGGLISFSSYNSVHNNCEQDAVTISIINGLTSVYSATV 319

  Fly   381 IFSIIGFLAHE-----------------------------------LNVDVEKVVD--------- 401
            |:|||||.|.|                                   ||:....::.         
Zfish   320 IYSIIGFRATENYDICLDSNILSLLNAFDLPEGSITENNYTVALQQLNISRPDIIQELQLKTCDM 384

  Fly   402 --------QGAGLAFIVYPEVVTRLPVSPVWAVLFFVMLLTLGLDSQFALMETVTTAILD----- 453
                    :|.||||||:.|.:|::||||:|:||||:||..|||.:.|..:|.|...:.|     
Zfish   385 QTLLSEGVEGTGLAFIVFTEAITKMPVSPLWSVLFFIMLFCLGLSTMFGNIEGVVVPLQDLNLLP 449

  Fly   454 -RFPNLRQYKIWVVLSVAIFGYIGGLGFTTNSGMYWLQLMDKYAANWSVLLIAISECILIAWIYG 517
             |:|.    :::..|: .:..::..|.|..:||.|||.|.|.:|.:..:|:||:.|.|.:.::||
Zfish   450 KRWPK----EVFTGLT-CVVSFLTALVFVQSSGNYWLALFDGFAGSIPLLVIALCELIAVVYVYG 509

  Fly   518 SQRFLNDIQGMIGKRSWFWNFFWGIMWRYITPATLLFILFFNWVEYKPAKYGHYV---------- 572
            ..||..||:.|:|.:.   |.||.|.||:::|..||.||.|.::.....:..:.|          
Zfish   510 IDRFNEDIKFMVGHKP---NIFWQISWRFLSPVILLVILIFYFITTVSKQLTYNVWDPQSADFPT 571

  Fly   573 -----YPMWADAVGWIVGLLPVLVIFLVAF-QEIWR 602
                 ||.|...|.:::..:|.|.|..||. :.:||
Zfish   572 LKEVDYPNWISVVIFVLAGVPSLCIPGVAIGRALWR 607

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GlyTNP_611836.2 SNF 57..597 CDD:395155 206/612 (34%)
Herpes_BLLF1 <884..1135 CDD:282904
slc6a19a.1NP_001091648.1 SLC5-6-like_sbd 31..611 CDD:444915 209/620 (34%)
Blue background indicates that the domain is not in the aligned region.

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