DRSC/TRiP Functional Genomics Resources

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Protein Alignment GlyT and slc6a9

DIOPT Version :9

Sequence 1:NP_611836.2 Gene:GlyT / 37772 FlyBaseID:FBgn0034911 Length:1188 Species:Drosophila melanogaster
Sequence 2:XP_005163551.1 Gene:slc6a9 / 494490 ZFINID:ZDB-GENE-050105-3 Length:653 Species:Danio rerio


Alignment Length:674 Identity:286/674 - (42%)
Similarity:425/674 - (63%) Gaps:43/674 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 TALIQLDATG--PGAGGAGESEHERGTWTGRFDFLLSLLGYSVGLGNVWRFPYLCYNNGGGAFLI 97
            ||.:..|..|  ||.....:....||.|..:.:|:|:.:||:||||||||||||||.||||||:.
Zfish     7 TAAVMADQNGAVPGEPVKRDENSRRGNWGNQIEFVLTSVGYAVGLGNVWRFPYLCYRNGGGAFMF 71

  Fly    98 PFTIMLVIAGLPLMFMELSFGQYAALGPVAVYRRFCPLFRGLGTGMILVSAIVMLYYNLIIAWTI 162
            |:.||||..|:||.|:||||||:.:||.:.|: :..|:|:|:|.||::||..:.:|||::|....
Zfish    72 PYFIMLVFCGIPLFFLELSFGQFTSLGCLGVW-KVSPMFKGVGYGMMVVSTYIGIYYNVVICIAF 135

  Fly   163 FYMFASFAPVLPWQNCEPAWSTKYCFSYAQADQCEATNGTYYLRTCHNATSAAENNITTLALGAL 227
            :|.|.|...:|||..|...|:|..|.......:..||...         .||..:.:|.:.....
Zfish   136 YYFFMSMTNLLPWTYCNNPWNTPDCSGVVSTHRANATFAN---------MSAVVSGVTEIVNRTK 191

  Fly   228 KRPPAEEYFNNFVLGLSKGIEETGSIKLSLAACLFLAWTIVFLCLCKGVQSSGKVVYFTALFPYV 292
            :..|:|||:.|:||.:|.||...|.::|.:..||.::|.:|||||.:||:||||||||||.||||
Zfish   192 RTSPSEEYWRNYVLNISDGIGNFGEVRLPILGCLAVSWFVVFLCLIRGVKSSGKVVYFTATFPYV 256

  Fly   293 VLVILFVRGVTLPGASTGILFYLTPDWKQLANAQVWGDAAVQIFFALSPAWGGLITLSSYNKFSN 357
            ||.|||:||:||.||.:||.:||||.|:::.:|:||||||.|||::|..|||||||::|||||.|
Zfish   257 VLTILFIRGITLDGAISGIKYYLTPQWQKILDAKVWGDAASQIFYSLGCAWGGLITMASYNKFHN 321

  Fly   358 NCYKDSLIVAFCNIATSFFAGLVIFSIIGFLAHELNVDVEKVVDQGAGLAFIVYPEVVTRLPVSP 422
            ||::||:|::..|..||.:||.|||||:||:||.|.|||.:|.|.|.||||:.|||.:|.||:||
Zfish   322 NCFRDSIIISVTNCGTSVYAGFVIFSILGFMAHHLGVDVSEVADHGPGLAFVAYPEALTLLPISP 386

  Fly   423 VWAVLFFVMLLTLGLDSQFALMETVTTAILDRFPN--LRQYKIWVVLSVAIFGYIGGLGFTTNSG 485
            :|::|||.||:.|||.:||.|:||:.||::|....  :.:.|.:|.|.|||.|::.|:..||.:|
Zfish   387 LWSLLFFFMLILLGLGTQFCLLETLVTAVVDEIGTDWIIKNKTYVTLGVAIIGFLLGVPLTTQAG 451

  Fly   486 MYWLQLMDKYAANWSVLLIAISECILIAWIYGSQRFLNDIQGMIGKRSWFWNF----FWGIMWRY 546
            :|||.|||.|||::|:::|:...||.|.::||.:.:..|::.|:|       |    |:.|.|||
Zfish   452 IYWLLLMDNYAASFSLVIISCIMCICIMYVYGHKNYFKDVEMMLG-------FPPPIFFRICWRY 509

  Fly   547 ITPATLLFILFFNWVEYKPAKYGHYVYPMWADAVGWIVGL-----LPVLVIFLVAFQEIWRAPMS 606
            ::|..:.|||.|..::|||..|..||||.|:..:|:.:.|     :|:..:|.:|..|      .
Zfish   510 VSPFIITFILIFTVIQYKPITYNDYVYPGWSLVIGFAMALSSVICIPIYALFKIAMSE------G 568

  Fly   607 LSFRDRIKHLLQPTAEWGPAGRPCVNLHAE-RYQSQNYDG--VTNTKILIEEEASPKQAANKKDR 668
            .:|.:|:|:.::|..:||||    :..|.: ||.:...:.  |:..|..:::|...|....:|:.
Zfish   569 STFLERLKNSVKPDPDWGPA----LQEHRKGRYATAGPESVEVSPLKEDLKDEGKDKLTEKEKET 629

  Fly   669 QLTLDVDVDVECLPLATVGKRPGA 692
            :...::.:.:.....:|:...|.|
Zfish   630 EKKDEIGLTIPGSNGSTLNPTPSA 653

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GlyTNP_611836.2 SNF 57..603 CDD:249680 261/556 (47%)
slc6a9XP_005163551.1 SLC6sbd_GlyT1 15..598 CDD:212067 274/609 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 568 1.000 Domainoid score I220
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 584 1.000 Inparanoid score I969
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm26298
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR11616
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R10344
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
88.000

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