DRSC/TRiP Functional Genomics Resources

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Protein Alignment GlyT and slc6a5

DIOPT Version :9

Sequence 1:NP_611836.2 Gene:GlyT / 37772 FlyBaseID:FBgn0034911 Length:1188 Species:Drosophila melanogaster
Sequence 2:NP_001009557.1 Gene:slc6a5 / 494450 ZFINID:ZDB-GENE-050105-2 Length:786 Species:Danio rerio


Alignment Length:650 Identity:304/650 - (46%)
Similarity:416/650 - (64%) Gaps:56/650 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 STAISGCASGTALIQLDATGPGA------------GGAGESEHERGTWTGRFDFLLSLLGYSVGL 77
            :|.|.|....|:::....|||..            ...|:....||.|:.:.||:||::||:|||
Zfish   133 TTIILGTDGNTSVLPGTVTGPPTDDTGRLFQDDDDDDGGDENKARGNWSNKLDFILSMVGYAVGL 197

  Fly    78 GNVWRFPYLCYNNGGGAFLIPFTIMLVIAGLPLMFMELSFGQYAALGPVAVYRRFCPLFRGLGTG 142
            |||||||||.:.|||||||||:.|||.:||:|:..:|:|.||:|:.|||:|::.. |..:|.|..
Zfish   198 GNVWRFPYLAFQNGGGAFLIPYLIMLGLAGIPIFLLEVSLGQFASQGPVSVWKAI-PALQGCGIA 261

  Fly   143 MILVSAIVMLYYNLIIAWTIFYMFASFAPVLPWQNCEPAWSTKYCFSYAQADQCEATNGTYYLRT 207
            |:::|.::.:|||:|:.||::|:|||....|||..|:..|:|..|          .......|.|
Zfish   262 MLIISVLIAIYYNIIMCWTLYYLFASLKETLPWATCKNEWNTVEC----------KDKDMLLLDT 316

  Fly   208 C----HNATSAAENNITTLAL-----GALKR------------PPAEEYFNNFVLGLSKGIEETG 251
            |    .|.||...   ||..|     |.|.:            .|:||||...||.:|||||..|
Zfish   317 CILRDRNITSIKN---TTFCLSANVVGNLSKLLNVTVDNKTYVSPSEEYFKYNVLHISKGIEYPG 378

  Fly   252 SIKLSLAACLFLAWTIVFLCLCKGVQSSGKVVYFTALFPYVVLVILFVRGVTLPGASTGILFYLT 316
            .|:..|||||||||.||:..|.||::||||||||||.|||||||||.:||||||||.:|||:::|
Zfish   379 DIRWPLAACLFLAWLIVYASLAKGIKSSGKVVYFTATFPYVVLVILLIRGVTLPGAGSGILYFIT 443

  Fly   317 PDWKQLANAQVWGDAAVQIFFALSPAWGGLITLSSYNKFSNNCYKDSLIVAFCNIATSFFAGLVI 381
            |.|::|.:|:||.|||.||||:||.||||||||||||||.||||:|:|||...|.|||.|||.||
Zfish   444 PKWEKLNDAKVWKDAATQIFFSLSAAWGGLITLSSYNKFHNNCYRDTLIVTCTNSATSIFAGFVI 508

  Fly   382 FSIIGFLAHELNVDVEKVVDQGAGLAFIVYPEVVTRLPVSPVWAVLFFVMLLTLGLDSQFALMET 446
            ||:|||:||||.|.:|.|.|:|.|:||:||||.:||||:||.||::||:||||||||:.||.:||
Zfish   509 FSVIGFMAHELKVPIESVADEGPGIAFVVYPEALTRLPLSPFWAIIFFLMLLTLGLDTMFATIET 573

  Fly   447 VTTAILDRFPN-LRQYKIWVVLSVAIFGYIGGLGFTTNSGMYWLQLMDKYAANWSVLLIAISECI 510
            :.|::.|.||. ||::|....|...:..::.|....|.||||.|||:|.:||::|:::|||.|.:
Zfish   574 IVTSVSDEFPKYLRKHKPQFTLVCCLSFFVLGFPMITESGMYMLQLVDTFAASYSLVIIAIFELV 638

  Fly   511 LIAWIYGSQRFLNDIQGMIGKRSWFWNFFWGIMWRYITPATLLFILFFNWVEYKPAKYGHYVYPM 575
            .|::|||.|||..||:.|||.:.   |.||.:.|.::||..|.|||..:..::|...|..|.||.
Zfish   639 GISYIYGLQRFCEDIEMMIGFQP---NKFWRVCWAFVTPTILTFILALSLYQWKVMTYEDYTYPN 700

  Fly   576 WADAVGWIVGLLPVLVIFLVAFQEIWRAPMSLSFRDRIKHLLQPTAEWGPAGRPCVNLHAERYQS 640
            |:..:||::.:..|:.|.::...::..||.||.  :|:|.:..|..:|||.   .:....|||::
Zfish   701 WSMVLGWLMVICSVIWIPIMFAIKMHLAPGSLI--ERLKLVCSPQPDWGPF---LMKHRGERYKN 760

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GlyTNP_611836.2 SNF 57..603 CDD:249680 283/567 (50%)
slc6a5NP_001009557.1 SLC5-6-like_sbd 177..775 CDD:294310 296/605 (49%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 568 1.000 Domainoid score I220
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H37901
Inparanoid 1 1.050 584 1.000 Inparanoid score I969
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm26298
orthoMCL 1 0.900 - - OOG6_100873
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R10344
SonicParanoid 1 1.000 - - X6052
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1110.760

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