DRSC/TRiP Functional Genomics Resources

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Protein Alignment GlyT and slc6a1b

DIOPT Version :9

Sequence 1:NP_611836.2 Gene:GlyT / 37772 FlyBaseID:FBgn0034911 Length:1188 Species:Drosophila melanogaster
Sequence 2:NP_001007363.1 Gene:slc6a1b / 492490 ZFINID:ZDB-GENE-041114-57 Length:600 Species:Danio rerio


Alignment Length:589 Identity:250/589 - (42%)
Similarity:354/589 - (60%) Gaps:57/589 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 ERGTWTGRFDFLLSLLGYSVGLGNVWRFPYLCYNNGGGAFLIPFTIMLVIAGLPLMFMELSFGQY 120
            :|.||.|:||||||.:||::||||||||||||..|||||||||:.:.|:.||:||.|:|.:.|||
Zfish    42 DRETWQGKFDFLLSCVGYAIGLGNVWRFPYLCGKNGGGAFLIPYFLTLIFAGVPLFFLETALGQY 106

  Fly   121 AALGPVAVYRRFCPLFRGLGTGMILVSAIVMLYYNLIIAWTIFYMFASFAPVLPWQNCEPAWSTK 185
            .::|.:.|: :..|:|:|:|....::|..:.:||.:||||.|:|::.||...|||::|:..|:|.
Zfish   107 TSIGGLGVW-KLAPMFKGVGLAAAVLSFWLNIYYIVIIAWAIYYLYNSFTTDLPWKSCDNPWNTD 170

  Fly   186 YCFSYAQADQCEATNGTYYLRTCHNATSAAENNITTLALGALKRPPAEEYFNNFVLGLSKGIEET 250
            .|||            .|.:....|.|||                 ..|::...:..|:.|:|:.
Zfish   171 KCFS------------NYSMANIGNMTSA-----------------VVEFWERNMHQLTDGLEKP 206

  Fly   251 GSIKLSLAACLFLAWTIVFLCLCKGVQSSGKVVYFTALFPYVVLVILFVRGVTLPGASTGILFYL 315
            |.|:|.||..|.:||.:|:.|:.|||..:||||||:|.:||.:|.|||:||||||||..|||||:
Zfish   207 GEIRLPLAITLAIAWVLVYFCIWKGVGWTGKVVYFSATYPYFMLFILFIRGVTLPGAKEGILFYV 271

  Fly   316 TPDWKQLANAQVWGDAAVQIFFALSPAWGGLITLSSYNKFSNNCYKDSLIVAFCNIATSFFAGLV 380
            ||::.:|..::||.|||.||||:.....|.||.|.|||.|:||.||||:||...|..||.|||.|
Zfish   272 TPEFSKLKESEVWLDAATQIFFSYGLGLGSLIALGSYNPFNNNVYKDSIIVCCINSFTSMFAGFV 336

  Fly   381 IFSIIGFLAHELNVDVEKVVDQGAGLAFIVYPEVVTRLPVSPVWAVLFFVMLLTLGLDSQFALME 445
            ||||:||:||.....:..|...|.||||:.|||.||:||:||:||||||.|||.||:||||..:|
Zfish   337 IFSIVGFMAHITKRPIADVAASGPGLAFLAYPEAVTQLPISPLWAVLFFSMLLMLGIDSQFCTVE 401

  Fly   446 TVTTAILDRFPN-LRQYKIWVVLSVAIFGYIGGLGFTTNSGMYWLQLMDKYAANWSVLL-IAISE 508
            ...||::|.||. ||..:...:..|.:..|:.||...|..|:|..:|.|.|:|:...|| :...|
Zfish   402 GFITALVDEFPRALRGRREIFIAVVCLVSYLIGLSNITQGGLYVFKLFDYYSASGMCLLFLVFFE 466

  Fly   509 CILIAWIYGSQRFLNDIQGMIGKRSWFWNFFWGIMWRYITPATLLFILFFNWVEYKPAKYGHYVY 573
            |:.|:|.||..:|..:::.|||.:...|   |.:.|...||..:..:..|:.|:..|....:||:
Zfish   467 CVSISWFYGVNKFYGNLEEMIGYKPCIW---WKLCWVVFTPLIVAGVFLFSAVQMVPLTLNNYVF 528

  Fly   574 PMWADAVGWIVGLLPVLVI-------FLVAFQEIWRAPMSLSFRDRIKHLLQPTA------EWGP 625
            |.|...|||.:.|..:::|       ||.         :..|:::|::.::||||      |.||
Zfish   529 PKWGQGVGWCMALSSMVLIPGYMGYMFLT---------LKGSYKERLRIMIQPTAAAVRTQENGP 584

  Fly   626 AGRP 629
            ..:|
Zfish   585 EQQP 588

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GlyTNP_611836.2 SNF 57..603 CDD:249680 240/554 (43%)
slc6a1bNP_001007363.1 SLC5-6-like_sbd 2..600 CDD:294310 250/589 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 1 1.000 - - FOG0000575
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.820

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