DRSC/TRiP Functional Genomics Resources

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Protein Alignment GlyT and CG4476

DIOPT Version :9

Sequence 1:NP_611836.2 Gene:GlyT / 37772 FlyBaseID:FBgn0034911 Length:1188 Species:Drosophila melanogaster
Sequence 2:NP_648293.1 Gene:CG4476 / 39056 FlyBaseID:FBgn0035969 Length:629 Species:Drosophila melanogaster


Alignment Length:623 Identity:223/623 - (35%)
Similarity:341/623 - (54%) Gaps:52/623 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 VGGGGGVVCPSTAISGCA-SGTALIQLDATGPGAGGAGE---SEHERGTWTGRFDFLLSLLGYSV 75
            |.||    .|....|.|| ||.||:: .:..|.|..:.|   ....|..|....:||:|.:..||
  Fly    10 VSGG----LPKLETSRCAGSGEALLK-PSLLPMALESSELSPDRKARDNWGSSLEFLMSCIALSV 69

  Fly    76 GLGNVWRFPYLCYNNGGGAFLIPFTIMLVIAGLPLMFMELSFGQYAALGPVAVYRRFCPLFRGLG 140
            |||||||||:....|||||||||:.::|.:.|.|:.:||:..||:::.|.|.|: .|.||.||:|
  Fly    70 GLGNVWRFPFTALENGGGAFLIPYLVVLFVVGKPIYYMEMLLGQFSSRGIVQVF-DFAPLMRGVG 133

  Fly   141 TGMILVSAIVMLYYNLIIAWTIFYMFASFAPVLPWQNCEPAWSTKYCFSYAQADQCEATNGTYYL 205
            ...:|...::..||..::|.|:.|.|.|||..|||..|...|          .|.|.:.:|...|
  Fly   134 YAQLLALGVLATYYASVMALTLRYFFDSFASELPWSFCREEW----------GDGCVSASGGQPL 188

  Fly   206 RTCHNATSAAENNITTLALGALKR---PPAEEYFNNFVLGLSKGIEE-TGSIKLSLAACLFLAWT 266
            :                  |.|.|   ...:.|....||..:..:|| .|....|||..|.::|.
  Fly   189 Q------------------GQLSRNFSSSTQLYLQRIVLNETDSLEEGIGYPSGSLALMLGISWL 235

  Fly   267 IVFLCLCKGVQSSGKVVYFTALFPYVVLVILFVRGVTLPGASTGILFYLTPDWKQLANAQVWGDA 331
            .|.|.:.:||:||||..|..|||||||:.||.||.:|||||..|::::|||.|::|...|||.:|
  Fly   236 TVTLIIIRGVKSSGKAAYVLALFPYVVMFILLVRALTLPGAYDGVMYFLTPQWEKLLEPQVWYNA 300

  Fly   332 AVQIFFALSPAWGGLITLSSYNKFSNNCYKDSLIVAFCNIATSFFAGLVIFSIIGFLAHELNV-D 395
            ..|:||:|:..:|.:|..||||:|.:|.|:|:.||...:..||..:|::||.|:|.||||... |
  Fly   301 VTQVFFSLAVCFGVIIMYSSYNRFGHNVYRDANIVTTLDTFTSLLSGVIIFGILGNLAHESGTKD 365

  Fly   396 VEKVVDQGAGLAFIVYPEVVTRLPVSP-VWAVLFFVMLLTLGLDSQFALMETVTTAILDRFPNLR 459
            :..||..|.|||||.||:.:.:..:.| |:::|||.||..||:.|...::..:.|.:.|:|.|: 
  Fly   366 IASVVKAGPGLAFISYPDAIAKFKMFPQVFSLLFFAMLFMLGVGSNVGMVSCIMTVLKDQFVNV- 429

  Fly   460 QYKIW-VVLSVAIFGYIGGLGFTTNSGMYWLQLMDKYAANWSVLLIAISECILIAWIYGSQRFLN 523
              |:| :|:|:::.|::.||.:.|..|.:.:.|||.:...:..|:.||.|.|.:.||||::|...
  Fly   430 --KLWIIVVSLSVIGFLVGLIYITPGGQHIITLMDFHGVTFVSLVSAIFELIAVGWIYGTKRLCQ 492

  Fly   524 DIQGMIGKRSWFWNFFWGIMWRYITPATLLFILFFNWVEYKPAKYGHYVYPMWADAVGWIVGLLP 588
            |.:.|:..::   :.::.|.|..:||..:|.||.::.:..:|..|....:|:....|||.|....
  Fly   493 DAEYMLNIKT---SNYYRICWSIVTPLVMLVILVYSLLTMRPLSYNGQEFPLVYRVVGWCVSGCI 554

  Fly   589 VLVIFLVAFQEIWRAPMSLSFRDRIKHLLQPTAEWGPA 626
            :..:|..|....::.|.. |.:.||.:.::|.::|||:
  Fly   555 IGQLFYWAGYANFKQPKG-SLKSRINNSIKPHSDWGPS 591

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GlyTNP_611836.2 SNF 57..603 CDD:249680 201/552 (36%)
CG4476NP_648293.1 SLC6sbd 52..526 CDD:271359 191/508 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11616
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.920

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