DRSC/TRiP Functional Genomics Resources

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Protein Alignment GlyT and slc6a22.1

DIOPT Version :9

Sequence 1:NP_611836.2 Gene:GlyT / 37772 FlyBaseID:FBgn0034911 Length:1188 Species:Drosophila melanogaster
Sequence 2:XP_005166076.1 Gene:slc6a22.1 / 368923 ZFINID:ZDB-GENE-030616-629 Length:584 Species:Danio rerio


Alignment Length:573 Identity:232/573 - (40%)
Similarity:334/573 - (58%) Gaps:37/573 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 RGTWTGRFDFLLSLLGYSVGLGNVWRFPYLCYNNGGGAFLIPFTIMLVIAGLPLMFMELSFGQYA 121
            ||.|:.:.:|:|::.|..:|||||||||||||.||||.|.||:.:.|...|:||..||.:.|||.
Zfish    30 RGQWSSKVEFILAVAGQIIGLGNVWRFPYLCYKNGGGVFFIPYVVFLFACGIPLFLMETALGQYT 94

  Fly   122 ALGPVAVYRRFCPLFRGLGTGMILVSAIVMLYYNLIIAWTIFYMFASFAPVLPWQNCEPAWSTKY 186
            :.|.|..:|:.||||.|||.|..:|......||.:|:||..||:|:||:..|||.:|...|:::.
Zfish    95 SQGSVTCWRKICPLFEGLGYGSQVVVLYSSAYYIIILAWAFFYLFSSFSGELPWASCRNWWNSEN 159

  Fly   187 CFSYAQADQCEATNGTYYLRTCHNATSAAENNITTLALGALKRPPAEEYFNNFVLGLSKGIEETG 251
            |..:      :...|...|....||:|                 |.:|::...||.::..:.|.|
Zfish   160 CVEF------DRMQGAKNLSFMANASS-----------------PVKEFWERRVLNITGSVNELG 201

  Fly   252 SIKLSLAACLFLAWTIVFLCLCKGVQSSGKVVYFTALFPYVVLVILFVRGVTLPGASTGILFYLT 316
            |::..||.||.|||.|.:.|:.|||:|:||||||||.||||:|::|.:||:|||||..||.|||.
Zfish   202 SVRWELALCLLLAWVICYFCVWKGVKSTGKVVYFTATFPYVMLMVLLIRGLTLPGAIDGITFYLY 266

  Fly   317 PDWKQLANAQVWGDAAVQIFFALSPAWGGLITLSSYNKFSNNCYKDSLIVAFCNIATSFFAGLVI 381
            |:..:||:.|||.||..|||::.:...|.|..|.||||::||||||.:.:...|..|||.||..|
Zfish   267 PNPARLADPQVWMDAGTQIFYSYALCIGCLTALGSYNKYNNNCYKDCVYLCLLNSGTSFVAGFAI 331

  Fly   382 FSIIGFLAHELNVDVEKVVDQGAGLAFIVYPEVVTRLPVSPVWAVLFFVMLLTLGLDSQFALMET 446
            ||::||:|.|..||:..|.:.|.|||||.||..|..:|::.:|::.||:|::.|||||:|..:|:
Zfish   332 FSVLGFMALEQGVDISVVAESGPGLAFIAYPRAVAMMPMAQLWSICFFLMIILLGLDSEFVGLES 396

  Fly   447 VTTAILDRFPNL-----RQYKIWVVLSVAIFGYIGGLGFTTNSGMYWLQLMDKYA-ANWSVLLIA 505
            :.|||.|..||.     |:....:|:.:|.|  :.||...|..|:|..||.|.|: :..::||.|
Zfish   397 LMTAITDMNPNFFLQGHRRKLFLLVICIACF--LIGLLMVTEGGLYVFQLFDYYSCSGMTLLLFA 459

  Fly   506 ISECILIAWIYGSQRFLNDIQGMIGKRSWFWNFFWGIMWRYITPATLLFILFFNWVEYKPAKYGH 570
            |::.|.|.|.||:.|...:|..|||....   ......|:||||...:....|:.|::.|.|:.:
Zfish   460 IAQSICIGWFYGADRLYENIADMIGYHPL---TLMKYCWKYITPIVCIGTFIFSLVKFTPLKFNN 521

  Fly   571 -YVYPMWADAVGWIVGLLPVLVIFLVAFQEIWRAPMSLSFRDRIKHLLQPTAE 622
             |.||.|..|.||...|...|::.:.....|...|.:|  :.|::.|..|.::
Zfish   522 TYEYPWWGYAAGWWFTLSSTLLVPIWMIYAILVTPGTL--KQRLRVLCTPASD 572

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GlyTNP_611836.2 SNF 57..603 CDD:249680 227/552 (41%)
slc6a22.1XP_005166076.1 SLC6sbd-TauT-like 30..569 CDD:271387 231/568 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.820

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