DRSC/TRiP Functional Genomics Resources

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Protein Alignment GlyT and CG8850

DIOPT Version :9

Sequence 1:NP_611836.2 Gene:GlyT / 37772 FlyBaseID:FBgn0034911 Length:1188 Species:Drosophila melanogaster
Sequence 2:NP_725122.2 Gene:CG8850 / 36331 FlyBaseID:FBgn0033708 Length:629 Species:Drosophila melanogaster


Alignment Length:643 Identity:226/643 - (35%)
Similarity:340/643 - (52%) Gaps:61/643 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 QSSKSGSAGVGGVGGGGGVVCPSTAISGCASGTALIQLDATGPGAGGAGESEHERGTWTGRFDFL 67
            |.|:.|..     |...|:   ||.|.........|..:|       ..||..:|..|:...:||
  Fly    18 QGSREGHP-----GSNDGI---STVIYSAEGEELTINCEA-------ESESSGQRDQWSRGVEFL 67

  Fly    68 LSLLGYSVGLGNVWRFPYLCYNNGGGAFLIPFTIMLVIAGLPLMFMELSFGQYAALGPVAVYRRF 132
            .|.:..|||||||||||::...|||||||||:.|:|::.|.|:.::|:..||:::.|.:..: ..
  Fly    68 FSCIALSVGLGNVWRFPFIALENGGGAFLIPYVIVLLLIGRPVYYLEVIIGQFSSRGCIRAF-DM 131

  Fly   133 CPLFRGLGTGMILVSAIVMLYYNLIIAWTIFYMFASFAPVLPWQNCEPAWSTKYCFSYAQADQCE 197
            .|:.||:..|.:..:|:...||..|:|.||.|:.|||:.||||..|...|. |.|.         
  Fly   132 APIMRGIAYGQVYSTALATTYYACIMALTIRYLVASFSEVLPWTYCLVEWG-KSCV--------- 186

  Fly   198 ATNGTYYLRTCHNATSAAENNITTLALGALKRPPAEEYFNNFVLGLSKGIEET--GSIKLSLAAC 260
                         ||.|...|.:::..|.   ..||.:|...||...:.:::.  |:....|..|
  Fly   187 -------------ATGATAANDSSIVQGV---SSAELFFTQTVLREPESLDDNGLGTPSWDLVLC 235

  Fly   261 LFLAWTIVFLCLCKGVQSSGKVVYFTALFPYVVLVILFVRGVTLPGASTGILFYLTPDWKQLANA 325
            |...|.|:...|.||::||||..||.||||||::::|.:|.||||||..||:::|.|.|.||.|.
  Fly   236 LLATWVIIGTILSKGIRSSGKASYFLALFPYVIMIVLLIRAVTLPGAWQGIVYFLKPQWSQLLNP 300

  Fly   326 QVWGDAAVQIFFALSPAWGGLITLSSYNKFSNNCYKDSLIVAFCNIATSFFAGLVIFSIIGFLAH 390
            .||..|..|:||:|:..:|.|:..:|:|.|:.|.:||.:|:...:..||..||.:||.|:|.||.
  Fly   301 HVWYAAITQMFFSLAICFGTLVMYASFNDFNKNVHKDVIIITTIDSLTSILAGCIIFGILGNLAF 365

  Fly   391 ELNV-DVEKVVDQGAGLAFIVYPEVVTRLPVSP-VWAVLFFVMLLTLGLDSQFALMETVTTAILD 453
            |.|. |:.:||..|||||||.|||.:.:....| ::|||||.|||.||:.|...:...|...:.|
  Fly   366 ETNTKDISQVVKGGAGLAFISYPEAIAKFKYLPQLFAVLFFFMLLVLGIGSNIGMASAVVNVVKD 430

  Fly   454 RFPNLRQYKIWVV-LSVAIFGYIGGLGFTTNSGMYWLQLMDKYAANWSVLLIAISECILIAWIYG 517
            ||.:|..   |:: :|.:|.|::.||.:.|..|.:.|.|:|.|...:..|::||:|.:.:.||||
  Fly   431 RFTHLPH---WLLAVSASIIGFLCGLVYMTPGGQFVLNLVDFYGCTFIALVLAIAELLAVGWIYG 492

  Fly   518 SQRFLNDIQGMIGKRSWFWNFFWGIMWRYITPATLLFILFFNWVEYKPAKYGHYVYPMWADAVGW 582
            .:|..:||:.|:..::   :|:|.|.|..:.|..:..:|.:....|:|..|....||......||
  Fly   493 VKRICSDIEFMLNVKT---SFYWRICWAIVAPGLMFLVLVYMLFSYEPLTYRGVQYPPVYYMAGW 554

  Fly   583 IVGLLPVLVIFLVAFQEIWRAPMSLSFRDRIKHLLQPTAEWGPAGRPCVNLHAERYQS 640
            |:..|.||.:...|...|::.| ..:|..:....:||||.|||       |..:::::
  Fly   555 IIWGLGVLQLPFWALVTIYQQP-GKTFGSKFGLAMQPTANWGP-------LQTQKFEA 604

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GlyTNP_611836.2 SNF 57..603 CDD:249680 204/550 (37%)
CG8850NP_725122.2 SLC6sbd 58..532 CDD:271359 190/506 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11616
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.920

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