DRSC/TRiP Functional Genomics Resources

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Protein Alignment GlyT and SLC6A18

DIOPT Version :9

Sequence 1:NP_611836.2 Gene:GlyT / 37772 FlyBaseID:FBgn0034911 Length:1188 Species:Drosophila melanogaster
Sequence 2:NP_872438.2 Gene:SLC6A18 / 348932 HGNCID:26441 Length:628 Species:Homo sapiens


Alignment Length:639 Identity:219/639 - (34%)
Similarity:328/639 - (51%) Gaps:129/639 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 PGAGGAGESEHERGTWTGRFDFLLSLLGYSVGLGNVWRFPYLCYNNGGGAFLIPFTIMLVIAGLP 109
            |.|...|:   ||..|..:..:|||..|::|||||:|||||||...||||||||:.|.||..|:|
Human     9 PAACDLGD---ERPKWDNKAQYLLSCTGFAVGLGNIWRFPYLCQTYGGGAFLIPYVIALVFEGIP 70

  Fly   110 LMFMELSFGQYAALGPVAVYRRFCPLFRGLGTGMILVSAIVMLYYNLIIAWTIFYMFASFAPVLP 174
            :..:||:.||....|.|.|:....|...|:|.|.:.:|.::.||||.|:||.::|:..||...||
Human    71 IFHVELAIGQRLRKGSVGVWTAISPYLSGVGLGCVTLSFLISLYYNTIVAWVLWYLLNSFQHPLP 135

  Fly   175 WQNCEPAWSTKYCFSYAQADQCEATNGTYYLRTCHNATSAAENNITTLALGALKRPPAEEYF-NN 238
            |.:|.|                 ..|.|.::..|..::                   |..|| ..
Human   136 WSSCPP-----------------DLNRTGFVEECQGSS-------------------AVSYFWYR 164

  Fly   239 FVLGLSKGIEETGSIKLSLAACLFLAWTIVFLCLCKGVQSSGKVVYFTALFPYVVLVILFVRGVT 303
            ..|.::..|.::|||:..|..||..:|.:|::|:.:|::::|||:||||||||:||.|..:||:|
Human   165 QTLNITADINDSGSIQWWLLICLAASWAVVYMCVIRGIETTGKVIYFTALFPYLVLTIFLIRGLT 229

  Fly   304 LPGASTGILFYLTPDWKQLANAQVWGDAAVQIFFALSPAWGGLITLSSYNKFSNNCYKDSLIVAF 368
            ||||:.|:::..||:...|.|.:||.|||.||||:||.|:||.|..:|||...|:|.||::::|.
Human   230 LPGATKGLIYLFTPNMHILQNPRVWLDAATQIFFSLSLAFGGHIAFASYNSPRNDCQKDAVVIAL 294

  Fly   369 CNIATSFFAGLVIFSIIGFLA-----H------------------------------ELNVDVEK 398
            .|..||.:|.:.:||::||.|     |                              .||....|
Human   295 VNRMTSLYASIAVFSVLGFKATNDYEHCLDRNILSLINDFDFPEQSISRDDYPAVLMHLNATWPK 359

  Fly   399 VVDQ-----------------GAGLAFIVYPEVVTRLPVSPVWAVLFFVMLLTLGLDSQFALMET 446
            .|.|                 |.||||:|:.|....:|.:||||:|||.||.||||.:.|..:|.
Human   360 RVAQLPLKACLLEDFLDKSASGPGLAFVVFTETDLHMPGAPVWAMLFFGMLFTLGLSTMFGTVEA 424

  Fly   447 VTTAILD--RFPNLRQYKIWVVLS-----VAIFGYIGGLGFTTNSGMYWLQLMDKYAANWSVLLI 504
            |.|.:||  ..|.      ||...     |.:..::....||..||.|||::.|.:||:.::|::
Human   425 VITPLLDVGVLPR------WVPKEALTGLVCLVCFLSATCFTLQSGNYWLEIFDNFAASPNLLML 483

  Fly   505 AISECILIAWIYGSQRFLNDIQGMIGKRSWFWNFFWGIMWRYITPATL-LFILFFNWVEYKPAKY 568
            |..|.:.:.::||.:||.:||..|.|:|.   :.:|.:.||.::|..| :|:.:...:.:||.:|
Human   484 AFLEVVGVVYVYGMKRFCDDIAWMTGRRP---SPYWRLTWRVVSPLLLTIFVAYIILLFWKPLRY 545

  Fly   569 GHY-------------VYPMWADAVGWIVGLLPVLVIFLVAFQEI-------WR 602
            ..:             :||.||.|...::.|||||.:.:.|..::       ||
Human   546 KAWNPKYELFPSRQEKLYPGWARAACVLLSLLPVLWVPVAALAQLLTRRRRTWR 599

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GlyTNP_611836.2 SNF 57..603 CDD:249680 215/627 (34%)
SLC6A18NP_872438.2 SLC6sbd_B0AT3 17..591 CDD:212086 214/618 (35%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 602..628
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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