DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment GlyT and SLC6A19

DIOPT Version :9

Sequence 1:NP_611836.2 Gene:GlyT / 37772 FlyBaseID:FBgn0034911 Length:1188 Species:Drosophila melanogaster
Sequence 2:NP_001003841.1 Gene:SLC6A19 / 340024 HGNCID:27960 Length:634 Species:Homo sapiens


Alignment Length:633 Identity:229/633 - (36%)
Similarity:321/633 - (50%) Gaps:126/633 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 LDATGPGAGGAGESEHE----RGTWTGRFDFLLSLLGYSVGLGNVWRFPYLCYNNGGGAFLIPFT 100
            |||..|........|.|    |..|..:..::|:.||:.|||||||||||||.::|||||:|||.
Human    11 LDARIPSLAELETIEQEEASSRPKWDNKAQYMLTCLGFCVGLGNVWRFPYLCQSHGGGAFMIPFL 75

  Fly   101 IMLVIAGLPLMFMELSFGQYAALGPVAVYRRFCPLFRGLGTGMILVSAIVMLYYNLIIAWTIFYM 165
            |:||:.|:||:::|.:.||....|.:.|:....|..:|||...:|.|.:|.||||.||:|.::|:
Human    76 ILLVLEGIPLLYLEFAIGQRLRRGSLGVWSSIHPALKGLGLASMLTSFMVGLYYNTIISWIMWYL 140

  Fly   166 FASFAPVLPWQNCEPAWSTKYCFSYAQADQCEATNGTYYLRTCHNATSAAENNITTLALGALKRP 230
            |.||...|||.:| |.                ..|.|.|:..|..::                  
Human   141 FNSFQEPLPWSDC-PL----------------NENQTGYVDECARSS------------------ 170

  Fly   231 PAEEYFNNFVLGLSKGIEETGSIKLSLAACLFLAWTIVFLCLCKGVQSSGKVVYFTALFPYVVLV 295
            |.:.::....|.:|..|.::|||:..:..||..||:::::|..:|::::||.||.|:..|||||.
Human   171 PVDYFWYRETLNISTSISDSGSIQWWMLLCLACAWSVLYMCTIRGIETTGKAVYITSTLPYVVLT 235

  Fly   296 ILFVRGVTLPGASTGILFYLTPDWKQLANAQVWGDAAVQIFFALSPAWGGLITLSSYNKFSNNCY 360
            |..:||:||.||:.||:|..||:..:||....|.||..|:||:.|.|:||||:.||||...|||.
Human   236 IFLIRGLTLKGATNGIVFLFTPNVTELAQPDTWLDAGAQVFFSFSLAFGGLISFSSYNSVHNNCE 300

  Fly   361 KDSLIVAFCNIATSFFAGLVIFSIIGFLA---------------------HELNVDVEKVVD--- 401
            |||:||:..|..||.:..:|::|:|||.|                     .|.||..|..||   
Human   301 KDSVIVSIINGFTSVYVAIVVYSVIGFRATQRYDDCFSTNILTLINGFDLPEGNVTQENFVDMQQ 365

  Fly   402 ----------------------------QGAGLAFIVYPEVVTRLPVSPVWAVLFFVMLLTLGLD 438
                                        :|.||||||:.|.:|::|:||:|:||||:||..|||.
Human   366 RCNASDPAAYAQLVFQTCDINAFLSEAVEGTGLAFIVFTEAITKMPLSPLWSVLFFIMLFCLGLS 430

  Fly   439 SQFALMETVTTAILDRFPNLRQY-KIW--------VVLSVAIFGYIGGLGFTTNSGMYWLQLMDK 494
            |.|..||.|...:.|    ||.. ..|        :.|...:.|:|    ||.|||.|||.|:|.
Human   431 SMFGNMEGVVVPLQD----LRVIPPKWPKEVLTGLICLGTFLIGFI----FTLNSGQYWLSLLDS 487

  Fly   495 YAANWSVLLIAISECILIAWIYGSQRFLNDIQGMIGKRSWFWNFFWGIMWRYITPATLLFI-LFF 558
            ||.:..:|:||..|...:.::||..||..||:.|||.:.   |.||.:.||.::|..:|.| |||
Human   488 YAGSIPLLIIAFCEMFSVVYVYGVDRFNKDIEFMIGHKP---NIFWQVTWRVVSPLLMLIIFLFF 549

  Fly   559 NWVE---------YKPA-----KYGHYVYPMWADAVGWIVGLLPVLVI 592
            ..||         :.|.     |.....||.|...|..||..:|.|.|
Human   550 FVVEVSQELTYSIWDPGYEEFPKSQKISYPNWVYVVVVIVAGVPSLTI 597

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GlyTNP_611836.2 SNF 57..603 CDD:249680 223/612 (36%)
SLC6A19NP_001003841.1 SLC5-6-like_sbd 32..612 CDD:294310 223/612 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.