DRSC/TRiP Functional Genomics Resources

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Protein Alignment GlyT and slc6a19b

DIOPT Version :9

Sequence 1:NP_611836.2 Gene:GlyT / 37772 FlyBaseID:FBgn0034911 Length:1188 Species:Drosophila melanogaster
Sequence 2:NP_956030.1 Gene:slc6a19b / 326030 ZFINID:ZDB-GENE-030131-4755 Length:651 Species:Danio rerio


Alignment Length:701 Identity:231/701 - (32%)
Similarity:337/701 - (48%) Gaps:161/701 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 ESEHERGTWTGRFDFLLSLLGYSVGLGNVWRFPYLCYNNGGGAFLIPFTIMLVIAGLPLMFMELS 116
            |...:|..|..:..::|:.:|:.|||||||||||||.::|||||:|||.|:||..|:||:.:|.:
Zfish    28 EEAGDRPKWDNKAQYMLTCVGFCVGLGNVWRFPYLCQSHGGGAFMIPFLILLVFEGIPLLHLEFA 92

  Fly   117 FGQYAALGPVAVYRRFCPLFRGLGTGMILVSAIVMLYYNLIIAWTIFYMFASFAPVLPWQNCEPA 181
            .||....|.|.|:|...|...|:|...:.||.:|.||||.||||.::|.|.||...|||..| |.
Zfish    93 IGQRLRKGSVGVWRTINPYMLGVGIASMCVSFLVSLYYNTIIAWVMWYFFNSFQDPLPWSQC-PI 156

  Fly   182 WSTKYCFSYAQADQCEATNGTYYLRTCHNATSAAENNITTLALGALKRPPAEEYFNNFVLGLSKG 246
                            ..|.|..:..|.                  |..|.:.::....|..|..
Zfish   157 ----------------NENRTGPIPECG------------------KSSPVDYFWYRETLNTSAA 187

  Fly   247 IEETGSIKLSLAACLFLAWTIVFLCLCKGVQSSGKVVYFTALFPYVVLVILFVRGVTLPGASTGI 311
            |::||.:::.:..||..||.::::|..:|::::||.||.|:..||:||.|..:||:||.|:..||
Zfish   188 IDDTGGLQVWMVLCLISAWAVLYVCCIRGIETTGKAVYVTSTLPYLVLTIFLIRGLTLKGSVDGI 252

  Fly   312 LFYLTPDWKQLANAQVWGDAAVQIFFALSPAWGGLITLSSYNKFSNNCYKDSLIVAFCNIATSFF 376
            .|..|||..:|||...|.||..|:|::.|.|:||||:.||||...|||.:|::|::..|..||.:
Zfish   253 KFLFTPDINELANPSTWLDAGAQVFYSFSLAFGGLISFSSYNSVHNNCEQDAVIISVINAFTSIY 317

  Fly   377 AGLVIFSIIGFLAHE-----------------------------------LNVDVEKVVD----- 401
            |..||:|||||.|.|                                   ||.....::.     
Zfish   318 AATVIYSIIGFRATERFDDCMNGNILTLLNTFDLPEGFINQSNYQDVFQSLNSTSPDIISSLSLK 382

  Fly   402 ------------QGAGLAFIVYPEVVTRLPVSPVWAVLFFVMLLTLGLDSQFALMETVTTAILDR 454
                        :|.||||||:.|.:|::|:||:|:||||:||..|||.|.|..:|.|...:.|.
Zfish   383 TCDLNNFLSEGVEGTGLAFIVFTEAITKMPLSPLWSVLFFIMLFCLGLSSMFGNIEGVLVPLQDL 447

  Fly   455 --FPNLRQYKIW---VVLSV-AIFGYIGGLGFTTNSGMYWLQLMDKYAANWSVLLIAISECILIA 513
              ||     |.|   ::..| .:...:.||.|...||.|||.|.|.:|.:..:|:||.||.|.:.
Zfish   448 GVFP-----KSWPKEIISGVTCLVCCLVGLIFVQGSGNYWLALFDSFAGSIPLLIIAFSEMIGVV 507

  Fly   514 WIYGSQRFLNDIQGMIGKRSWFWNFFWGIMWRYITPATLL--FILFFN-----------W----- 560
            ::||..||..|:..|||.:.   |.||...||:|:|..:|  |:.:|:           |     
Zfish   508 YVYGIDRFNEDLIFMIGHKP---NIFWQATWRFISPLIMLAIFVFYFSTTVTKEIFYSAWDPESE 569

  Fly   561 ----VEYKPAKYGHYVYPMWADAVGWIVGLLPVLVIFLVAFQEIWRAPMSLSFRDRI--KHLLQP 619
                :|.||       ||.|...:.:::..:|.|.:...|   ::||     .||..  ||   |
Zfish   570 NFPTLEKKP-------YPTWIYVIIFLLAGVPSLAVPGTA---VFRA-----IRDYCCKKH---P 616

  Fly   620 TAEWGPAGRPCVNLHAERYQSQNYDGVTNTKILIEEEASPKQAANKKDRQL 670
            :|                 ..|..|.| :.|:.:.:|....|...|.|::|
Zfish   617 SA-----------------SIQQLDSV-SYKVQMHDEEVKTQKTEKFDQKL 649

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GlyTNP_611836.2 SNF 57..603 CDD:249680 213/625 (34%)
slc6a19bNP_956030.1 SLC6sbd_B0AT1 33..613 CDD:212085 217/637 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

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