DRSC/TRiP Functional Genomics Resources

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Protein Alignment GlyT and Slc6a18

DIOPT Version :9

Sequence 1:NP_611836.2 Gene:GlyT / 37772 FlyBaseID:FBgn0034911 Length:1188 Species:Drosophila melanogaster
Sequence 2:NP_058859.2 Gene:Slc6a18 / 29323 RGDID:69352 Length:615 Species:Rattus norvegicus


Alignment Length:649 Identity:227/649 - (34%)
Similarity:335/649 - (51%) Gaps:126/649 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 EHERGTWTGRFDFLLSLLGYSVGLGNVWRFPYLCYNNGGGAFLIPFTIMLVIAGLPLMFMELSFG 118
            |.||..|..:..:|||.:|::|||||:|||||||:.:||||||||:.|.||..|:||.::||:.|
  Rat    14 EDERPKWDNKLQYLLSCIGFAVGLGNIWRFPYLCHTHGGGAFLIPYFIALVFEGIPLFYIELAIG 78

  Fly   119 QYAALGPVAVYRRFCPLFRGLGTGMILVSAIVMLYYNLIIAWTIFYMFASFAPVLPWQNCEPAWS 183
            |....|.:.|::...|...|:|.|...||.:|.||||.|:.|.:::...||...|||..| |.  
  Rat    79 QRLRRGSIGVWKTISPYLGGVGLGCFSVSFLVSLYYNTILLWVLWFFLNSFQHPLPWSTC-PL-- 140

  Fly   184 TKYCFSYAQADQCEATNGTYYLRTCHNATSAAENNITTLALGALKRPPAEEYF-NNFVLGLSKGI 247
                          ..|.|.:::.|.::.:.:                   || ....|.::..|
  Rat   141 --------------DLNRTGFVQECQSSGTVS-------------------YFWYRQTLNITSDI 172

  Fly   248 EETGSIKLSLAACLFLAWTIVFLCLCKGVQSSGKVVYFTALFPYVVLVILFVRGVTLPGASTGIL 312
            ..||:|:..|..||...||.|:||:.:|::|:|||:||||||||:||.|..:||:|||||:.|:.
  Rat   173 SNTGTIQWKLFLCLVACWTTVYLCVIRGIESTGKVIYFTALFPYLVLTIFLIRGLTLPGATEGLT 237

  Fly   313 FYLTPDWKQLANAQVWGDAAVQIFFALSPAWGGLITLSSYNKFSNNCYKDSLIVAFCNIATSFFA 377
            :..||:.|.|.|.:||.|||.||||:||.|:||.|..:|||:..|||.||::.:|..|..||.:|
  Rat   238 YLFTPNMKILQNPRVWLDAATQIFFSLSLAFGGHIAFASYNQPRNNCEKDAVTIALVNSMTSLYA 302

  Fly   378 GLVIFSIIGFLAH---------------------ELNVD-------------------------- 395
            .:.||||:||.|.                     ||::.                          
  Rat   303 SITIFSIMGFKASNDYGRCLDRNILSLINEFDFPELSISRDEYPSVLMYLNATQPERVARLPLKT 367

  Fly   396 --VEKVVDQ---GAGLAFIVYPEVVTRLPVSPVWAVLFFVMLLTLGLDSQFALMETVTTAILDR- 454
              :|..:|:   |.||||||:.|.|..:|.:.||:||||.||.||||.|.|..||.|.|.:.|. 
  Rat   368 CHLEDFLDKSASGPGLAFIVFTEAVLHMPGASVWSVLFFGMLFTLGLSSMFGNMEGVITPLFDMG 432

  Fly   455 -FPN--LRQYKIWVVLSVAIFGYIGGLGFTTNSGMYWLQLMDKYAANWSVLLIAISECILIAWIY 516
             .|.  .::....||..:.   ::..:.||..||.|||::.|.:||:.::::.|..|.:.:..:|
  Rat   433 ILPKGVPKETMTGVVCFIC---FLSAICFTLQSGSYWLEIFDSFAASLNLIIFAFMEVVGVIHVY 494

  Fly   517 GSQRFLNDIQGMIGKRSWFWNFFWGIMWRYITPATLLFILFFNWV--------EYKP--AKYGHY 571
            |.:||.:||:.|.|:|.   :.:|.:.||.::| .|||.:|.:::        .||.  .:|.|:
  Rat   495 GIKRFCDDIEWMTGRRP---SLYWQVTWRVVSP-MLLFGIFLSYIVLLAQSSPSYKAWNPQYEHF 555

  Fly   572 ------VYPMWADAVGWIVGLLPVLVIFLVAFQEIWRAPMSLSFRDRIK--HL---LQPTAEWG 624
                  :||.|......::..||.|.:..:|.     |.:...:|.|.|  ||   |:|....|
  Rat   556 PSREEKLYPGWVQVTCVLLSFLPSLWVPGIAL-----AQLLFQYRQRWKNTHLESALKPQESRG 614

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GlyTNP_611836.2 SNF 57..603 CDD:249680 216/618 (35%)
Slc6a18NP_058859.2 SLC6sbd_B0AT3 16..591 CDD:212086 218/622 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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