DRSC/TRiP Functional Genomics Resources

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Protein Alignment GlyT and Slc6a17

DIOPT Version :9

Sequence 1:NP_611836.2 Gene:GlyT / 37772 FlyBaseID:FBgn0034911 Length:1188 Species:Drosophila melanogaster
Sequence 2:NP_001280618.1 Gene:Slc6a17 / 229706 MGIID:2442535 Length:727 Species:Mus musculus


Alignment Length:807 Identity:241/807 - (29%)
Similarity:361/807 - (44%) Gaps:215/807 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 LDATGPGAGGAGESEHE-----RGTWTGRFDFLLSLLGYSVGLGNVWRFPYLCYNNGGGAFLIPF 99
            |:..|...|....:|.|     |..|..:..::|:.:|:||||||:|||||||..|||||:|:|:
Mouse    38 LNVAGETGGKQKVAEEELDTEDRPAWNSKLQYILAQIGFSVGLGNIWRFPYLCQKNGGGAYLVPY 102

  Fly   100 TIMLVIAGLPLMFMELSFGQYAALGPVAVYRRFCPLFRGLGTGMILVSAIVMLYYNLIIAWTIFY 164
            .::|:|.|:||.|:||:.||....|.:.|:...||...|:|....:|...|.||||:||.|::||
Mouse   103 LVLLIIIGIPLFFLELAVGQRIRRGSIGVWHYVCPRLGGIGFSSCIVCLFVGLYYNVIIGWSVFY 167

  Fly   165 MFASFAPVLPWQNC-----------EPAWSTKYCFSYAQADQCEATNGTYYLRTCHNATSAAENN 218
            .|.||...|||..|           ||              :||.::.|.|              
Mouse   168 FFKSFQYPLPWSECPVIRNGTVAVVEP--------------ECEKSSATTY-------------- 204

  Fly   219 ITTLALGALKRPPAEEYFNNFVLGLSKGIEETGSIKLSLAACLFLAWTIVFLCLCKGVQSSGKVV 283
                            ::....|.:|..|.|:|.:...:..||.:||:||.:.:.||:||||||:
Mouse   205 ----------------FWYREALDISNSISESGGLNWKMTLCLLVAWSIVGMAVVKGIQSSGKVM 253

  Fly   284 YFTALFPYVVLVILFVRGVTLPGASTGILFYLTPDWKQLANAQVWGDAAVQIFFALSPAWGGLIT 348
            ||::|||||||....|||:.|.||..|||...||...::.:.|||.:||.|:||||...:||:|.
Mouse   254 YFSSLFPYVVLACFLVRGLLLRGAVDGILHMFTPKLDKMLDPQVWREAATQVFFALGLGFGGVIA 318

  Fly   349 LSSYNKFSNNCYKDSLIVAFCNIATSFFAGLVIFSIIGFLAHELN-----VDVEKVVD------- 401
            .|||||..|||:.|:.:|:|.|..||..|.||:|:::||.|:.:|     .:.||::.       
Mouse   319 FSSYNKQDNNCHFDAALVSFINFFTSVLATLVVFAVLGFKANIMNEKCVVENAEKILGYLNSNVL 383

  Fly   402 ----------------------------------------------------QGAGLAFIVYPEV 414
                                                                ||.|||||.:.|.
Mouse   384 SRDLIPPHVNFSHLTTKDYSEMYSVIMTVKEKQFPALGLDPCLLEDELDKSVQGTGLAFIAFTEA 448

  Fly   415 VTRLPVSPVWAVLFFVMLLTLGLDSQFALMETVTTAILDRFPNLRQYKIWVVLSVAIFGYIGGLG 479
            :|..|.||.|:|:||:||:.|||.|....|..:||.|:|.|   :..|....:...:|.:..||.
Mouse   449 MTHFPASPFWSVMFFLMLINLGLGSMIGTMAGITTPIIDTF---KVPKEMFTVGCCVFAFFVGLL 510

  Fly   480 FTTNSGMYWLQLMDKYAANWSVLLIAISECILIAWIYGSQRFLNDIQGMIGKRSWFWNFFWGIMW 544
            |...||.|::.:.|.|:|...:.:|.|.|.|.:|||||:::|:.::..|:|.:.:.:.|:   ||
Mouse   511 FVQRSGNYFVTMFDDYSATLPLTVIVILENIAVAWIYGTKKFMQELTEMLGFQPYRFYFY---MW 572

  Fly   545 RYITPATLLFIL-------------FFNWVEYKPAKYGHYVY-PMWADAVGWIVGLLPVLVIFLV 595
            ::::|..:..:.             :..|::.:.|:  .|:| |.||.|          |:|.|:
Mouse   573 KFVSPLCMAVLTTASIIQLGVSPPGYSAWIKEEAAE--RYLYFPNWAMA----------LLITLI 625

  Fly   596 AFQEIWRAPMSLSFRDRIKHLLQPTAEWGPAGRPCVNLHAERYQSQNYDGVTNTKILIEEEASPK 660
            |...:   |:.:.|..|..|||.                         ||.....:..::....|
Mouse   626 AVATL---PIPVVFILRHFHLLS-------------------------DGSNTLSVSYKKGRMMK 662

  Fly   661 QAANKKDRQLTLDVDVDVECLPLATVGKRPG-APKSMGKQGSSGNLQTNAKNGTHKSPTTEISP- 723
            ..:|.::...|..:           :.|.|. ||..|               .||:|   .:.| 
Mouse   663 DISNLEENDETRFI-----------LSKVPSEAPSPM---------------PTHRS---YLGPG 698

  Fly   724 SKQPLIPSEKDNKSANIKVLAAGTQSS 750
            |..||..|...|.......|.|.|..|
Mouse   699 STSPLDNSNNPNGRYGSGYLLASTPES 725

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GlyTNP_611836.2 SNF 57..603 CDD:249680 207/634 (33%)
Slc6a17NP_001280618.1 SLC6sbd_NTT4 60..648 CDD:271403 214/677 (32%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 680..727 17/64 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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