DRSC/TRiP Functional Genomics Resources

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Protein Alignment GlyT and Slc6a20b

DIOPT Version :9

Sequence 1:NP_611836.2 Gene:GlyT / 37772 FlyBaseID:FBgn0034911 Length:1188 Species:Drosophila melanogaster
Sequence 2:NP_035861.2 Gene:Slc6a20b / 22599 MGIID:1336891 Length:635 Species:Mus musculus


Alignment Length:644 Identity:225/644 - (34%)
Similarity:319/644 - (49%) Gaps:141/644 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 GAGGAGES---------------EHERGTWTGRFDFLLSLLGYSVGLGNVWRFPYLCYNNGGGAF 95
            ||||.|:.               |..|..|.....|||..:.|:|||||||||||||...|||:|
Mouse    22 GAGGPGQHPGRPRSTECAHPGVVEKVRPKWDNPLQFLLVCISYAVGLGNVWRFPYLCQMYGGGSF 86

  Fly    96 LIPFTIMLVIAGLPLMFMELSFGQYAALGPVAVYRRFCPLFRGLGTGMILVSAIVMLYYNLIIAW 160
            |:|:.|||::.|:||:::||:.||....|.:..:|...|...|:|...::||.:..:|:|:|..|
Mouse    87 LVPYIIMLIVEGMPLLYLELAVGQRMRQGSIGAWRTISPYLSGVGIASLVVSFLASVYFNVINTW 151

  Fly   161 TIFYMFASFAPVLPWQNCEPAWSTKYCFSYAQADQCEATNGTYYLRTCHNATSAAENNITTLALG 225
            .::|:|.||...|||..| |..|                |.|.|...|..|:|.           
Mouse   152 ALWYLFHSFQDPLPWSVC-PLNS----------------NHTGYDEECEKASST----------- 188

  Fly   226 ALKRPPAEEYF-NNFVLGLSKGIEETGSIKLSLAACLFLAWTIVFLCLCKGVQSSGKVVYFTALF 289
                    :|| ....|.:|..|:|.|.::...|.||.|||.:|:||:.:|.:|:|||||||...
Mouse   189 --------QYFWYRKTLNISPSIQENGGVQWEPALCLTLAWLMVYLCILRGTESTGKVVYFTTSL 245

  Fly   290 PYVVLVILFVRGVTLPGASTGILFYLTPDWKQLANAQVWGDAAVQIFFALSPAWGGLITLSSYNK 354
            ||.||:|..|||:||.||:.|:.:..||..:||||.:.|.:||.||||:|....||||..:|||:
Mouse   246 PYFVLIIYLVRGLTLHGATNGLAYMFTPKIEQLANPKAWINAATQIFFSLGLGCGGLIAFASYNE 310

  Fly   355 FSNNCYKDSLIVAFCNIATSFFAGLVIFSIIGFLA------------------------------ 389
            .||:|.|.:|||:..|..|:.|:.:|.|||.||.|                              
Mouse   311 PSNDCQKHALIVSVINSTTAIFSSIVTFSIYGFKATFNYENCLNKVILLLTNSFDLEDGFLTVSN 375

  Fly   390 ---------------------HELNVDVEKVVD---QGAGLAFIVYPEVVTRLPVSPVWAVLFFV 430
                                 |..|..:|..:|   ||.|||||||.|.:..:.||.:|:||:|.
Mouse   376 LEEVKNYLASTYPNKYSEVFPHIRNCSLESELDTAVQGTGLAFIVYTEAIKNMEVSQLWSVLYFF 440

  Fly   431 MLLTLGLDSQFALMETVTTAILDR------FPNLRQYKIWVVLSVAIFGYIGGLGFTTNSGMYWL 489
            ||||||:.|.......:.|.:.|.      .|......:..:|:.||     |:.||..:|.||.
Mouse   441 MLLTLGMGSMVGTGTAILTPLTDSKIISSYLPKEAISGLVCLLNCAI-----GMVFTMEAGNYWF 500

  Fly   490 QLMDKYAANWSVLLIAISECILIAWIYGSQRFLNDIQGMIGKR-SWFWNFFWGIMWRYITPATL- 552
            .|.:.|.|..|:|||.:.|.|.:.::||.:||.:|::.|.|:. ||:|.    :||.:::|..: 
Mouse   501 DLFNDYTATLSLLLIVLVETIAVCYVYGLKRFESDLRAMTGRTLSWYWK----VMWAFVSPLLIV 561

  Fly   553 -LFILFFN------WVEYK--PAKYGHYV---YPMWADAVGWIVGLL---PVLVIFLVA 596
             |||.:.:      .::|:  .|..||.|   ||.:|.||   :|||   ..:.|.|||
Mouse   562 GLFIFYLSDYILTGTLQYQAWDATQGHVVTKDYPTYALAV---IGLLVASSTMCIPLVA 617

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GlyTNP_611836.2 SNF 57..603 CDD:249680 219/618 (35%)
Slc6a20bNP_035861.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..38 5/15 (33%)
SLC5-6-like_sbd 45..620 CDD:294310 220/621 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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