DRSC/TRiP Functional Genomics Resources

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Protein Alignment GlyT and Slc6a18

DIOPT Version :9

Sequence 1:NP_611836.2 Gene:GlyT / 37772 FlyBaseID:FBgn0034911 Length:1188 Species:Drosophila melanogaster
Sequence 2:NP_001035782.1 Gene:Slc6a18 / 22598 MGIID:1336892 Length:615 Species:Mus musculus


Alignment Length:627 Identity:220/627 - (35%)
Similarity:326/627 - (51%) Gaps:117/627 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 EHERGTWTGRFDFLLSLLGYSVGLGNVWRFPYLCYNNGGGAFLIPFTIMLVIAGLPLMFMELSFG 118
            |.||..|..:..:|||.:|::|||||:|||||||..:||||||||:.|.||..|:||.::||:.|
Mouse    14 EDERPKWDNKLQYLLSCIGFAVGLGNIWRFPYLCQTHGGGAFLIPYFIALVFEGIPLFYIELAIG 78

  Fly   119 QYAALGPVAVYRRFCPLFRGLGTGMILVSAIVMLYYNLIIAWTIFYMFASFAPVLPWQNCEPAWS 183
            |....|.:.|::...|...|:|.|...||.:|.||||.::.|.:::...||...|||..| |.  
Mouse    79 QRLRRGSIGVWKTISPYLGGVGLGCFSVSFLVSLYYNTVLLWVLWFFLNSFQHPLPWSTC-PL-- 140

  Fly   184 TKYCFSYAQADQCEATNGTYYLRTCHNATSAAENNITTLALGALKRPPAEEYF-NNFVLGLSKGI 247
                          ..|.|.:::.|.::.:.:                   || ....|.::..|
Mouse   141 --------------DLNRTGFVQECQSSGTVS-------------------YFWYRQTLNITSDI 172

  Fly   248 EETGSIKLSLAACLFLAWTIVFLCLCKGVQSSGKVVYFTALFPYVVLVILFVRGVTLPGASTGIL 312
            ..||:|:..|..||...|:.|:||:.:|::|:|||:||||||||:||.|..:||:|||||:.|::
Mouse   173 SNTGTIQWKLFLCLVACWSTVYLCVIRGIESTGKVIYFTALFPYLVLTIFLIRGLTLPGATEGLI 237

  Fly   313 FYLTPDWKQLANAQVWGDAAVQIFFALSPAWGGLITLSSYNKFSNNCYKDSLIVAFCNIATSFFA 377
            :..||:.|.|.|.:||.|||.||||:||.|:||.|..:|||...|||.||::|:|..|..||.:|
Mouse   238 YLFTPNMKTLQNPRVWLDAATQIFFSLSLAFGGHIAFASYNPPRNNCEKDAVIIALVNSMTSLYA 302

  Fly   378 GLVIFSIIGFLAH---------------------ELNVD-------------------------- 395
            .:.|||::||.|.                     ||::.                          
Mouse   303 SIAIFSVMGFKASNDYGRCLDRNILSLINEFDLPELSISRDEYPSVLMYLNATQTARVAQLPLKT 367

  Fly   396 --VEKVVDQ---GAGLAFIVYPEVVTRLPVSPVWAVLFFVMLLTLGLDSQFALMETVTTAILDRF 455
              :|..:|:   |.||||||:.|.|..:|.:.||:||||.||.||||.|.|..||.|.|.:||..
Mouse   368 CHLEDFLDKSASGPGLAFIVFTEAVLHMPGASVWSVLFFGMLFTLGLSSMFGNMEGVITPLLDMG 432

  Fly   456 PNLRQYKIWVVLSVAIFG-YIGGLGFTTNSGMYWLQLMDKYAANWSVLLIAISECILIAWIYGSQ 519
            ...:.....|:..|..|. ::..:.||..||.|||::.|.:||:.::::.|..|.:.:..|||.:
Mouse   433 ILPKGIPKEVMTGVICFACFLSAICFTLQSGGYWLEIFDSFAASLNLIIFAFMEVVGVIHIYGMK 497

  Fly   520 RFLNDIQGMIGKRSWFWNFFWGIMWRYITPATLLFILFFNWV--------EYKP--AKYGHY--- 571
            ||.:||:.|.|:|.   ..:|.:.||.::| .|||.:|.:::        .||.  .:|.|:   
Mouse   498 RFCDDIEWMTGRRP---GLYWQVTWRVVSP-MLLFGIFLSYIVLLIQTPPSYKAWNPQYEHFPSR 558

  Fly   572 ---VYPMWADAVGWIVGLLPVLVI-------FLVAFQEIWRA 603
               .||.|......::..||.|.:       .|..:::.|:|
Mouse   559 EEKFYPGWVQVTCVLLSFLPSLWVPGVALAQLLSQYKQRWKA 600

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GlyTNP_611836.2 SNF 57..603 CDD:249680 217/622 (35%)
Slc6a18NP_001035782.1 SLC6sbd_B0AT3 16..591 CDD:212086 216/614 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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